Pairwise Alignments

Query, 611 a.a., exonuclease V subunit alpha from Klebsiella michiganensis M5al

Subject, 608 a.a., exonuclease V (RecBCD complex), alpha chain (NCBI) from Escherichia coli BW25113

 Score =  862 bits (2228), Expect = 0.0
 Identities = 443/611 (72%), Positives = 506/611 (82%), Gaps = 4/611 (0%)

Query: 1   MTMDELLLQAVEQRLLRPLDVQFALMVAQEAHPAVKLTAAILSRDAGEGHVCLPISRLAD 60
           M + + LL+AVE + LRPLDVQFAL VA + HPAV L AA+LS DAGEGHVCLP+SRL +
Sbjct: 1   MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN 60

Query: 61  DELLSAKTTALSEQILELTGAAESWLPLLLDSEAVSRGERPTPMILCGERLYLNRMWRNE 120
           +E   A    L+  + E+ G  ++W   LL S+AVSRG+ PTPMILCG+RLYLNRMW NE
Sbjct: 61  NE---ASHPLLATCVSEI-GELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNE 116

Query: 121 LTVARFFNEANQVLEVDEARLASTLDALFPPGDEIDWQKVAAAVALTRRISVISGGPGTG 180
            TVARFFNE N  +EVDEA LA TLD LFP  DEI+WQKVAAAVALTRRISVISGGPGTG
Sbjct: 117 RTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTG 176

Query: 181 KTTTVAKLLAALIQTNASPRCRIRLAAPTGKAAARLTESLGAALRRLPLTDEQKALVPTE 240
           KTTTVAKLLAALIQ     RCRIRLAAPTGKAAARLTESLG ALR+LPLTDEQK  +P +
Sbjct: 177 KTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPED 236

Query: 241 ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPEHGRVIFLG 300
           ASTLHRLLGAQPGSQR+R+HAGNPLHLDVLVVDEASMIDLPMMSRLIDALP+H RVIFLG
Sbjct: 237 ASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLG 296

Query: 301 DRDQLASVEAGAVLGDICAWVNAGFTPARAAQLGRLTGQPVPAGESEIAGALRDSLCLLQ 360
           DRDQLASVEAGAVLGDICA+ NAGFT  RA QL RLTG  VPAG    A +LRDSLCLLQ
Sbjct: 297 DRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQ 356

Query: 361 KSYRFGRHSGIGHLAWAVNSGERRAVRETLRQSFDDIALHPLSSTEEYEAMLVQAQAGYG 420
           KSYRFG  SGIG LA A+N G++ AV+   +Q F DI    L S E+Y AML +A AGYG
Sbjct: 357 KSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYG 416

Query: 421 RFLQLLRERAEPAELIAAFSEFQLLCALRDGPYGVSGVNEQLEQMLNRKRAIALPRHSRW 480
           R+L LL+ RAEP  +I AF+E+QLLCALR+GP+GV+G+NE++EQ + +KR I    HSRW
Sbjct: 417 RYLDLLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRW 476

Query: 481 YEGRPVMISRNDSALGLFNGDIGIALERDDGLRVWFPMPDGSIKSVQPSRLPEHDTAWAM 540
           YEGRPVMI+RNDSALGLFNGDIGIAL+R  G RVWF MPDG+IKSVQPSRLPEH+T WAM
Sbjct: 477 YEGRPVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAM 536

Query: 541 TVHKSQGSEFDHAALILPSRSVPLVTRELVYTAITRAKRQLSIYADEQVLTQAVVARTER 600
           TVHKSQGSEFDHAALILPS+  P+VTRELVYTA+TRA+R+LS+YADE++L+ A+  RTER
Sbjct: 537 TVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTER 596

Query: 601 RSGLADIFSAR 611
           RSGLA +FS+R
Sbjct: 597 RSGLAALFSSR 607