Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine synthase TruC from Klebsiella michiganensis M5al

Subject, 331 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase from Klebsiella michiganensis M5al

 Score =  118 bits (296), Expect = 1e-31
 Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 14/229 (6%)

Query: 4   ILYQDQWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLM 63
           ILY+D  ++ +NKPSG  VH         +  ++ +R +  + +   HRLDR TSGVLL+
Sbjct: 109 ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPE-ARFLELVHRLDRDTSGVLLV 167

Query: 64  GLSSEAGRLLSQQFEQHQMQKRYHAIARG-WLNDEAVLDYPLVEELDKIADKFARENKDP 122
                A R L +Q     MQK Y A+ RG W +   V+  PL++ + +  ++  R N++ 
Sbjct: 168 AKKRSALRSLHEQLRDKGMQKDYLALVRGQWQSHTKVVQAPLLKNILQSGERIVRVNQEG 227

Query: 123 QPAVTHYRGLATVEMAVATGRYPTTRYSLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHG 182
           +P+ T ++    VE          T  +LV   P TGR HQ+R H  +  HPI  D ++G
Sbjct: 228 KPSETRFK----VEERF-------THATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYG 276

Query: 183 DLRQNRSAAEHFGCDRLMLHASQLSLTHPFTGEPLVIRAGLDDVWMRAL 231
           D   ++  A   G +RL LHA+ L  THP +GE + + A LD+   R L
Sbjct: 277 DREFDKQLA-GTGLNRLFLHAAALKFTHPGSGEIMRVEAPLDNQLKRCL 324