Pairwise Alignments

Query, 352 a.a., recombinase RecA from Klebsiella michiganensis M5al

Subject, 355 a.a., recombinase RecA from Erwinia amylovora T8

 Score =  612 bits (1579), Expect = e-180
 Identities = 316/351 (90%), Positives = 330/351 (94%), Gaps = 5/351 (1%)

Query: 1   MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG 60
           MAID+NKQKALAAALGQIEKQFGKGSIMRLGEDR+MDVETISTGSLSLDIALGAGGLPMG
Sbjct: 1   MAIDDNKQKALAAALGQIEKQFGKGSIMRLGEDRTMDVETISTGSLSLDIALGAGGLPMG 60

Query: 61  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQP 120
           RIVEIYGPESSGKTTLTLQVIAAAQR+GKTCAFIDAEHALDPVYA+KLGVDIDNLLCSQP
Sbjct: 61  RIVEIYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQP 120

Query: 121 DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180
           DTGEQALEICDALARSGAVDVI+VDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
Sbjct: 121 DTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180

Query: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG 240
           GNLK S TLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGA+KEGD VVG
Sbjct: 181 GNLKNSGTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDEVVG 240

Query: 241 SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYSGDKIG 300
           SETRVKVVKNK+AAPFKQAEFQILYGEGIN +GELVDLGVK KLIEKAGAWYSY+GDKIG
Sbjct: 241 SETRVKVVKNKVAAPFKQAEFQILYGEGINIFGELVDLGVKHKLIEKAGAWYSYNGDKIG 300

Query: 301 QGKANAISWLKENPAAAKEIEKKVRELLLSNQDATPDFA-----VDGNSEA 346
           QGKANA ++LKENPA A EI+ K+R +LL NQD  PDF      VD  SEA
Sbjct: 301 QGKANAGNFLKENPAIANEIDAKLRAMLLGNQDDKPDFVPAAHEVDAESEA 351