Pairwise Alignments

Query, 594 a.a., ATPase AAA from Klebsiella michiganensis M5al

Subject, 656 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas sp. SVBP6

 Score =  308 bits (789), Expect = 5e-88
 Identities = 222/630 (35%), Positives = 324/630 (51%), Gaps = 58/630 (9%)

Query: 14  ASPLLSDSWCRS-QRYGLDPATDDFPRLHASELAERLASHSRLQTLAQPV---VNALSRK 69
           + P ++ SW R  + Y LDPA    P +   E    L S  RLQ + Q     +N+L ++
Sbjct: 28  SDPSIARSWLRCLEDYHLDPAQSMAPTV--LEHGRVLESRERLQQVLQIAGNEMNSLHQQ 85

Query: 70  VNDLQSVVVLSDASGLVLQTFGDTHAMQKAQRFALAPGNLWSESGRGTNAIGTALAIDDS 129
           ++     V+L+DA G++L         +  +R  L  G  WSE+  GTN IGT L    +
Sbjct: 86  LSGAGHAVLLTDARGVILNCVTAPTERRIFERAGLWLGADWSEAREGTNGIGTCLVERQA 145

Query: 130 CEIDGRQHFLTSNRGLYCAAVPLQSPDGNIAGVLDISGP----AHYPHARTLSWVKGAAK 185
             I   +HF   + GL C+A P+  P G +  VLD+S      +      T++ V  +AK
Sbjct: 146 VTIHQDEHFRGRHTGLTCSASPVFDPHGELLAVLDVSSARAEVSRQSQFHTMALVNLSAK 205

Query: 186 QIEYLWFKQSLHPQQWLMSLHPQPEKLDGVDELLLVFT-DAVLTAANRLAMREFSL---- 240
            IE  +F +     Q+L+  H Q E +    E LL F  D  + A N+ A+         
Sbjct: 206 MIESCYFLRYFE-NQYLLRFHLQAESVGLFSEGLLAFDGDGRICAVNQSALNLLGTVRGG 264

Query: 241 ----NAEQFGHLTFQQLFPRLR-QTAVSIPLPLAAGDRHYYYRLR----------APATA 285
                 + F   +  +L  R   Q + S PL    G R  +  LR          AP   
Sbjct: 265 LLGKPVDMFFDCSQSELLSRATAQASTSWPLRTRDG-RLLFASLRGQVRSMLPALAPLAT 323

Query: 286 SVAVTPRPGIDLLFSS-QREGEKLLRLLNAGIGLCIEGETGCGKEYVSRTLHRHSRWSGG 344
            V      GI L+  + Q +  + +R+    + L + GETGCGKE  ++ +H  S+ SG 
Sbjct: 324 PVKTEKAAGICLVDPALQNDFRRAVRVFERDVPLLLNGETGCGKEAFAKAVHLASQRSGK 383

Query: 345 KFVAINCAAIPESLIESELFGYQPGAFTGANKNGYIGKIREADGGVLFLDEIGDMPLTLQ 404
            FVA+NCA+IPESLIESELFGY+ G+FTGA K G  GK+++ADGG L LDEIGDMPL LQ
Sbjct: 384 AFVALNCASIPESLIESELFGYRGGSFTGARKEGMRGKLQQADGGTLLLDEIGDMPLALQ 443

Query: 405 TRLLRILQEKEVTPLGASRSSPVNFAVICATHRNLAQRVAEGTFREDLLYRLREFALTLP 464
           TRLLR+L+++ V P+G    + VN  +I ATHRNL +RV +G+FREDL YRL    + LP
Sbjct: 444 TRLLRVLEDRMVVPIGGEPQA-VNVRIISATHRNLLERVEDGSFREDLYYRLNGLEIELP 502

Query: 465 PLREWPELPAFIQRLWRDLGGEKRRVALGPALVQHLATQPWPGNVRQLQSLMRVLLALAE 524
            LRE  +    +  +  +  GE + V+L PA  + L    WPGNVRQL++++R L+AL +
Sbjct: 503 ALRERSDKSQLLDFILAEEAGE-QSVSLEPAARRALLDFAWPGNVRQLRNVLRTLVALCD 561

Query: 525 E-------------GETLAVGDLPQEYRSSPAP---RPPR-------GLQQHDAQLIADT 561
           +             G  L + D+P++   S  P     PR        L+  +   +  T
Sbjct: 562 DGCIRQSELPATIVGAALRLPDVPRDSNLSEPPLCGASPRRQGEGESPLEDAERSALLVT 621

Query: 562 LASYNGNISKAAQALGVARSTLYRRAARRG 591
           L  +  +++  A  LGV+R+TLYR+  + G
Sbjct: 622 LEKHRWHMTHVAAQLGVSRNTLYRKLRKHG 651