Pairwise Alignments

Query, 594 a.a., ATPase AAA from Klebsiella michiganensis M5al

Subject, 634 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas sp. SVBP6

 Score =  325 bits (832), Expect = 5e-93
 Identities = 219/595 (36%), Positives = 318/595 (53%), Gaps = 35/595 (5%)

Query: 21  SWCRSQRYGLDPATD-DFPRLHASELAERLASHSRLQTLAQPVVNALSRKVNDLQSVVVL 79
           SW RS  +G+   +  D      + L   LA++  L   A   ++ LS       ++++L
Sbjct: 40  SWRRSLDHGVGVHSQHDLGLAPVANLDLLLANNRLLLDAATAELDYLSGHQGQ-DALIIL 98

Query: 80  SDASGLVLQTFGDTHAMQKAQRFALAPGNLWSESGRGTNAIGTALAIDDSCEIDGRQHFL 139
           ++A   +L   G    ++ +    +APG  WSE+  GTNA+GTAL    + +ID  +HFL
Sbjct: 99  ANADATILAVEGPADVVRHSTEAGIAPGTRWSEAECGTNALGTALVEARTVQIDCGEHFL 158

Query: 140 TSNRGLYCAAVPLQSPDGNIAGVLDIS--GPAHYPHARTLSWVKGAAKQIEYLWFKQSLH 197
                  C +VP+  P G++ GVLD++  GP      RT + +  A  QIE   F  S +
Sbjct: 159 ERLSDYSCTSVPIHCPQGDLFGVLDLTRQGPLGRLQDRT-ALLALAVSQIEGKLFNNS-Y 216

Query: 198 PQQWLMSLHPQPEKLDGVDELLLVF--TDAVLTAANRLAMREFSLNAEQFGHLTFQQLFP 255
           PQQ +++ H + + L    + LL       +L A+N+      S      G      L  
Sbjct: 217 PQQIVLAFHSRRQYLGSPWQGLLALGLDGRILAASNQACQLLGSQREALLGQRCDSLLGM 276

Query: 256 RLRQTAV-----SIPLPLAAGDRHYYYRLRAPATASVAVTP----------RPGIDLLFS 300
           RL Q        S+     A    +Y  L+ P      V P          +P ++ L +
Sbjct: 277 RLEQWLARVQPGSVESTETAKGGFFYKALQVPQRPLSVVVPAARAPRQSTQQPDLERLGA 336

Query: 301 SQREGEKLLRLLNAGIG----LCIEGETGCGKEYVSRTLHRHSRWSGGKFVAINCAAIPE 356
                 + LR+   G+     + + GETG GKE V+R LH+ S  +G  FVA+NCAAIPE
Sbjct: 337 GNSRHARALRMARQGLANGLPVVLLGETGSGKEVVARALHQDSARAGKPFVAVNCAAIPE 396

Query: 357 SLIESELFGYQPGAFTGANKNGYIGKIREADGGVLFLDEIGDMPLTLQTRLLRILQEKEV 416
            LIESELFGY+ GAFTG+ + G IG++++A GG LFLDE+GDMPL LQ RLLR+LQE++V
Sbjct: 397 GLIESELFGYREGAFTGSRRGGMIGRLQQAHGGTLFLDEVGDMPLALQARLLRVLQERKV 456

Query: 417 TPLGASRSSPVNFAVICATHRNLAQRVAEGTFREDLLYRLREFALTLPPLREWPELPAFI 476
            PLGA +   ++ A+ICATHR+L  +V    FREDL YR+   ++ LP LRE  +LPA +
Sbjct: 457 APLGAGQEQDLDIALICATHRDLKAQVQSQQFREDLFYRIHGISVQLPALREREDLPALV 516

Query: 477 QRLWRDLGGEKRRVALGPALVQHLATQPWPGNVRQLQSLMRVLLALAEEGE-TLAVGDLP 535
           + L   LGG+   V L   L    A   WPGN+RQL+  +R+LLA+ E GE  L +  LP
Sbjct: 517 RSLLDRLGGQ--GVELSSELSALFAGYHWPGNIRQLEMTLRLLLAMREAGEQELGLDHLP 574

Query: 536 ----QEYRSSPAPRPPRGLQQHDAQLIADTLASYNGNISKAAQALGVARSTLYRR 586
                E R S  P P   ++   + LI   L  + GN++ AA+ALG++R+TLYR+
Sbjct: 575 DNLLDELRDSARP-PSTRMRDSQSVLIRQALERHAGNVTAAAEALGISRATLYRK 628