Pairwise Alignments

Query, 594 a.a., ATPase AAA from Klebsiella michiganensis M5al

Subject, 653 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  254 bits (649), Expect = 8e-72
 Identities = 204/620 (32%), Positives = 285/620 (45%), Gaps = 76/620 (12%)

Query: 20  DSWCRSQRYGLDPATDDFPRLHASELAERLASHSRLQTLAQPVVNALSRKVNDLQSVVVL 79
           DSW RS   G+DPA + +  + A  LA   A+H  L   A  V+  L     + +  + L
Sbjct: 53  DSWRRSVAAGIDPADNAYRFVAAETLAATQATHRVLIAAAAQVMRGLL--AYNPRGHINL 110

Query: 80  SDASGLVLQTFGDTHAMQKAQRFALAP-GNLWSESGRGTNAIGTALAIDDSCEIDGRQHF 138
           +DA G  L   G            + P G+   ES +GTN  G ALA D    +   ++F
Sbjct: 111 TDADGTTLYFCG----------LDITPVGSRLLESVQGTNCTGLALAEDRLVYVLAEENF 160

Query: 139 LTS--NRGLYCAAVPLQSPDGNIAGVLDISGPAHYPHARTLSWVKGAAKQIEYLWFKQSL 196
                 R ++CAA P+++  G    +L ++    + H  TL  V+ AA  +      Q L
Sbjct: 161 GIGLRQRRMHCAAAPIKNAQGQTLAMLTLTAEPGWFHFHTLGTVQAAADAVSRQMALQGL 220

Query: 197 HPQQWLMSLHPQPEKLDGVDELLLVFTD-AVLTAANRLAMREFSLNAEQFGHLTFQQLFP 255
                   L  Q   L+ ++E L+V  +   + A NR A   F +  E  G     Q F 
Sbjct: 221 --------LEEQQTVLEVLNEGLVVLDERGCIKALNRYARHLFGVGLELIG-----QPFQ 267

Query: 256 RLRQTAVSIPLPLAAGDR----HYYYRLRAPATASVAVTPRPGIDLLFSSQREGEKLLRL 311
           +L ++ +S  +  A  D     H + R +     SV    + G+ +     R   ++ R 
Sbjct: 268 QLGRSELSDSMGEAVRDLDCTFHLHNRSQLACLVSVCPLEQGGVIVSLRENRRIREITRR 327

Query: 312 L------------------------------NAGIGLCIEGETGCGKEYVSRTLHRHSRW 341
           L                               +     I GE+G GKE  ++ +H  S  
Sbjct: 328 LIGTQASYTFDTIQGHSRAIQDALHLGRIASRSDSTTLILGESGTGKELFAQAIHNGSDR 387

Query: 342 SGGKFVAINCAAIPESLIESELFGYQPGAFTGANKNGYIGKIREADGGVLFLDEIGDMPL 401
             G FVA+NC AIP  L++SELFG+  GAFTG+ + G  GK   ADGG +FLDEIGDM  
Sbjct: 388 CNGPFVAVNCGAIPRDLVQSELFGHVEGAFTGSARGGSAGKFELADGGTIFLDEIGDMSF 447

Query: 402 TLQTRLLRILQEKEVTPLGASRSSPVNFAVICATHRNLAQRVAEGTFREDLLYRLREFAL 461
             Q  LLR+LQE E+T +GA  S  V+  +I ATHRNL+Q VAEG FREDL YRL    L
Sbjct: 448 DAQVSLLRVLQEGEITRVGAKNSRQVDVRIIAATHRNLSQAVAEGAFREDLYYRLNVLNL 507

Query: 462 TLPPLR-EWPELPA----FIQRLWRDLGGEKRRVALGPALVQHLATQPWPGNVRQLQSLM 516
           T+PPLR    ++P     F+ R  R L   K      P  +  L+   WPGNVR+L++ +
Sbjct: 508 TVPPLRMRREDIPLLARHFLARCARSL--RKSVQGFSPEAMALLSAYGWPGNVRELENSI 565

Query: 517 RVLLALAEEGETLAVGDLPQEYRSSP-----APRPPRGLQQHDAQLIADTLASYNGNISK 571
                LA  G  +   DLP E R         P P + L  H+   I   L S  GNI  
Sbjct: 566 ERATNLA-TGALIEPVDLPLENRQRALLRGYEPHPAQDLSSHEMHAIVAALKSTGGNIRL 624

Query: 572 AAQALGVARSTLYRRAARRG 591
           AA+ L V+R  LY + +R G
Sbjct: 625 AARQLNVSRGGLYNKMSRFG 644