Pairwise Alignments

Query, 279 a.a., sugar ABC transporter permease from Klebsiella michiganensis M5al

Subject, 280 a.a., carbohydrate ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  135 bits (339), Expect = 1e-36
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 15/285 (5%)

Query: 1   MLSKRWDTAGRWCIYALLLIVFVGPFWGIVATAF--SGAPVKPGELLAWPNQFSFENFIF 58
           +L K     G WC+  +LL+  V PF+  + T+   SGA     ++  W     F N+  
Sbjct: 5   LLKKTLLRLGFWCLIGVLLLYAVFPFYYAIVTSLKPSGALF---QVSYWVESPDFSNYAA 61

Query: 59  AWMDIGVWQYLLNSILVVFFGTVLQVSVSALAAYALARKKFRGVALVSLVILSTMMLPEE 118
                   + + NS++V     +L + +S  AAYAL R KFRG   V +++L   M P+ 
Sbjct: 62  VLHQASFLRAIGNSLVVALCVVILALFLSVTAAYALGRVKFRGRGTVLMMVLGVSMFPQV 121

Query: 119 VIAIPLYMIINWRLPFIDASLYNSYLGMILP--VVGWAFSIFVLTEFMSAIPKELEEAAR 176
            +   L+ +I          LYN+   +IL   +    F+++VLT FM  +P ELEEAA 
Sbjct: 122 AVLSGLFEVIR------ALGLYNTSWALILSYTIFTLPFTVWVLTTFMGQLPHELEEAAI 175

Query: 177 IDGANEWQIFFHVILPLVKPALGTVVTFGFIMIWDQYLLPLIVVNQDSLNTIPVILGTLR 236
           +DGA+ W     V+LPL+ PAL T     FI  W+++L  L     D+  T+PV +  + 
Sbjct: 176 MDGASPWVTLTRVLLPLLWPALITTGLLAFIAAWNEFLFALTFTLTDTQRTVPVAIALIS 235

Query: 237 --TDESITPNIFIAITLLAMLPSIIVYLGLQKHFNRGIMSGAVKG 279
             +   +   + +A ++L  +P +I+ L  Q+    G+ +GA+KG
Sbjct: 236 GGSPHELPWGLLMAASVLVTVPLVILVLIFQRRIVSGLTAGALKG 280