Pairwise Alignments

Query, 250 a.a., fimbrial chaperone YfcS from Klebsiella michiganensis M5al

Subject, 249 a.a., putative membrane protein (VIMSS) from Escherichia coli BW25113

 Score =  135 bits (339), Expect = 1e-36
 Identities = 78/241 (32%), Positives = 130/241 (53%), Gaps = 22/241 (9%)

Query: 3   KTLVFATVAVLSASSLLPAEAALTVSRSRVIVNEGDKSVSMSVTNRNTQEPYLAQTWIED 62
           K ++ A V +   SS+  A  A+   R+R+I+NE DK  ++ +TN++   PYLAQTWIED
Sbjct: 7   KNIIAAGVLLSCMSSI--AWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWIED 64

Query: 63  ETEAKVTSPLMVLPPVQRIEAGSKSAVRVQVLPDIGKLPKDRESVFWFNLREIPPRSDKP 122
               K    ++ +PP+ R+    +  +R+     I +LPKDRE++F+FN+REIPP++DK 
Sbjct: 65  TKGNKSRDFIVTVPPMVRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKK 124

Query: 123 NVLTLALQTRLKIFWRPASIKVDAKYDSFPGIQNV-TLAKNGNRYTLNNPTPYHLTFVEG 181
           NV+ + +Q  LK+FWRP +I+++   D     + V  + +N      NN  PYH+T    
Sbjct: 125 NVMQVTMQHALKLFWRPKAIELED--DGVMTYEKVEIIRRNDGSIRFNNKMPYHVTL--- 179

Query: 182 RSSVKGKGKEGFEPIMVAPKAQTAL-------NVGAADLGATPVLVFVNDYGSLRLLPFQ 234
                  G  G   + + P+ Q+ +       N    ++ +T  + ++ND+G L      
Sbjct: 180 -------GYIGTNGVTMLPQTQSLMVTPFSYANTQFKNVPSTFQVGYINDFGGLSFYEIN 232

Query: 235 C 235
           C
Sbjct: 233 C 233