Pairwise Alignments

Query, 324 a.a., phage shock protein operon transcriptional activator from Klebsiella michiganensis M5al

Subject, 670 a.a., putative 2-component regulator, interaction with sigma 54 (VIMSS) from Escherichia coli BW25113

 Score =  223 bits (567), Expect = 1e-62
 Identities = 115/231 (49%), Positives = 158/231 (68%), Gaps = 1/231 (0%)

Query: 7   NLLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIASRLHFLSSRWQGPFISLNCA 66
           +++ ++ +  ++L+QV  +A  D  VL+ GE GTGKE+IA  +H LS R   P + +NCA
Sbjct: 346 DIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCA 405

Query: 67  ALNENLLDSELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVIEY 126
           A+  +LL+SELFGH+ GAFTGA   H GRFE ADGGTLFLDE+   P+ +Q KLLRV++ 
Sbjct: 406 AIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQE 465

Query: 127 GELERVGGSQPLQVNVRLVCATNADLPQMVEDGLFRADLLDRLAFDVVQLPPLRERQSDI 186
            E+ER+GGS+ + VNVR++ ATN DL QMVED  FR+DL  RL    ++LPPLR+R  DI
Sbjct: 466 REIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDI 525

Query: 187 MLLATQFAIQMCRELGLPLFPGFSERAAETLQNYRWPGNIRELKNVVERSV 237
            LLA  F  +M R +   +       A   L ++ WPGN+REL+NV+ER+V
Sbjct: 526 PLLAKHFTQKMARHMNRAI-DAIPTEALRQLMSWDWPGNVRELENVIERAV 575