Pairwise Alignments

Query, 173 a.a., RNA polymerase sigma factor FecI from Klebsiella michiganensis M5al

Subject, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  134 bits (338), Expect = 6e-37
 Identities = 67/161 (41%), Positives = 104/161 (64%), Gaps = 2/161 (1%)

Query: 4   SSAIASPLTLASLYSDHHGWLKKWLTHKLKSVYDADDVAQDTFVRIMAGGSLSTIRDPKS 63
           +SA+ S  T+  LY  HH WL  WL  +L   + A D+AQDT++R++       + +P++
Sbjct: 8   TSALTS--TVEGLYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRA 65

Query: 64  FLCTIANRVMIDLFRRNALERAWLEMLSQLPEELSPSPEQRQSQLELLQQIDAMLDGLNV 123
           FL T+A RV+ + FRR  LERA+L+ L+Q+PEE++P  EQ+    E L  +D +LDGL  
Sbjct: 66  FLATVAKRVLCNHFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPP 125

Query: 124 KAREAFLLSQLEGLTYADIASRLAVSVSSVKKYIAKATEHC 164
             + AFLL+Q++GL   +IA  L +S+++VK+Y+ KA   C
Sbjct: 126 LVKRAFLLAQVDGLGQGEIARELGISLATVKRYLNKAAMRC 166