Pairwise Alignments

Query, 411 a.a., multidrug transporter MdfA from Klebsiella michiganensis M5al

Subject, 393 a.a., multidrug effflux MFS transporter from Pseudomonas sp. SVBP6

 Score =  110 bits (276), Expect = 6e-29
 Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 12/333 (3%)

Query: 34  DMIQPGMLSVVAEFGVGNEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLTGVVWFI 93
           D   PG  ++   FG   + + T++ AY  G    Q   GP++DR GRR  +L GV  F 
Sbjct: 21  DFYLPGFPAMALAFGTDEKHIQTTLAAYFLGLSIGQLAYGPVADRFGRRIPLLVGVTLFT 80

Query: 94  VTCLATLLAQTIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIA 153
           V  LA   A +++   + RF+Q +  C    +  A + +  +     K+ + +  V  +A
Sbjct: 81  VASLACAFAPSLDTLIVARFVQALGGCAGMVLSRAIVSDKCDAVGSAKVFSQLMLVMGLA 140

Query: 154 PLLGPLVGAAWVHLLPWEMMFVLFAVLAAIAFFGLQKAMPETATRMGEKLSVKELGRDYR 213
           P+L P++G   V+L  W+ +F+   + +A+    +   +PE+      +  +    R Y 
Sbjct: 141 PILAPMLGGLMVNLYGWQSIFIALTLFSALCTLAVALGLPESLPANQPRQPLSGALRQYG 200

Query: 214 EVLKNLRFVAGALATGFVSLPLLAWIAQSPVIIISGEQATSYEYGLLQVPIFGALIAGNL 273
            + K   F+  AL  G     + A+IA SP + I      +  YG L    FG+  AG +
Sbjct: 201 RLFKERIFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHYGWL----FGSNAAGFI 256

Query: 274 VLARQTSRKTVRS----LIILGGWP-IMIGLLISAVATVASTHAY-LWMTAGLSVYAFGI 327
           ++A+  +R   +     L+    W  +  GL +  ++ +  T  + L +   + + + G 
Sbjct: 257 LVAQVNARLLAKRGPAFLLARAVWVYLAAGLTLLGISALHPTALWPLLIPLFICIASLGC 316

Query: 328 GLANAGLVRLTLFASEMSKGTVSAAMGMLQMLI 360
            + NA    ++        G+ SA +G LQ  +
Sbjct: 317 IIPNASACAMS--GQGARAGSASALLGCLQFSV 347