Pairwise Alignments

Query, 322 a.a., DNA-binding protein YbiB from Klebsiella michiganensis M5al

Subject, 337 a.a., DNA-binding protein YbiB from Ralstonia solanacearum PSI07

 Score =  210 bits (534), Expect = 4e-59
 Identities = 121/300 (40%), Positives = 169/300 (56%), Gaps = 5/300 (1%)

Query: 4   SKIIKEVGRGKNHARDLDVETARALYSRMLNGEVPELELGGILIALRIKGEGEAEMKGFY 63
           ++ IKE+GRG + AR L    ARAL++ ML G V +++LG IL+A RIKGE   E+ G  
Sbjct: 24  ARFIKEIGRGADGARALVKHDARALFAAMLEGRVADVQLGAILMAYRIKGETPEELDGML 83

Query: 64  EAMQNHTMKLTPPIAKP--MPIVIPSYNGARKQANLTPLLAVLLHKLGFPVIVHGVSHDP 121
           EA   H + L  P      +P+VIPSYNGAR+Q NL PLLA LL + G PV+VHG+    
Sbjct: 84  EATHAHCLPLPAPDTPDGTLPVVIPSYNGARRQPNLVPLLAALLAREGVPVLVHGIRRFD 143

Query: 122 TRVLTETIFELMGIPATLQAGQAQARLDSHQPVYVPVGALCPPLEKQLAMRWRMGVRNSA 181
            R+ T T+F  +G P      +A+ RL++ +  +VP+  L P L   L  R  +G+RNS+
Sbjct: 144 GRITTATLFGALGWPVCEHMDEARQRLENDRLAFVPIDVLSPDLTALLDKREIVGLRNSS 203

Query: 182 HTLAKLATPF---AEDAALRLSSVSHPEYVGRVAKFFAEIGGRALLMHGTEGEVYANPQR 238
           HT+ K+  P    A   ALRL S +HPEY   +  +F       LL  GTEGE  A+ +R
Sbjct: 204 HTVVKMLQPIGGHAPHEALRLVSYTHPEYRDTLTDYFLRHPANVLLARGTEGEAVADARR 263

Query: 239 CPQISLIDAAGTRVVNERQDGAAEQALVLPASKDPEVTARWIEHCSVGSEPLPQSLKIQL 298
              +  +       V E  +G++     LPA  D E TARWI     G +P+P+S+  Q+
Sbjct: 264 GSAVEWLHDGVHETVIEAAEGSSGTPPELPAGTDVEATARWIAAVLDGRQPVPESIARQV 323