Pairwise Alignments

Query, 322 a.a., DNA-binding protein YbiB from Klebsiella michiganensis M5al

Subject, 319 a.a., DNA-binding protein YbiB from Serratia liquefaciens MT49

 Score =  396 bits (1017), Expect = e-115
 Identities = 202/320 (63%), Positives = 240/320 (75%), Gaps = 6/320 (1%)

Query: 1   MDYSKIIKEVGRGKNHARDLDVETARALYSRMLNGEVPELELGGILIALRIKGEGEAEMK 60
           MDY+KIIKE+GRGKNHARDLD ETA  LY +ML GEV ELELGGILIALRIKGE E EM 
Sbjct: 1   MDYTKIIKEIGRGKNHARDLDRETAFQLYQKMLAGEVGELELGGILIALRIKGEAEEEML 60

Query: 61  GFYEAMQNHTMKLTPPIAKPMPIVIPSYNGARKQANLTPLLAVLLHKLGFPVIVHGVSHD 120
           GFY+AMQ   M+L  P  +PMP+V+PSYNGARKQANLTPLLA+LL ++G PV+VHGV  D
Sbjct: 61  GFYQAMQQQVMRLQVPQGRPMPVVLPSYNGARKQANLTPLLALLLTRVGLPVVVHGVLDD 120

Query: 121 PTRVLTETIFELMGIPATLQAGQAQARLDSHQPVYVPVGALCPPLEKQLAMRWRMGVRNS 180
            TRV +   F+ +G+P +  A  AQ RLD+ + V++PV AL  PL+ QL +RWRMGVRNS
Sbjct: 121 STRVTSAETFQALGLPWSPDAAHAQRRLDNGETVFIPVSALSAPLDLQLGLRWRMGVRNS 180

Query: 181 AHTLAKLATPFAEDAALRLSSVSHPEYVGRVAKFFAEIGGRALLMHGTEGEVYANPQRCP 240
           AHTLAKLATPF E   LR++SVSHPEYVGRVA FF +IG R LLMHGTEGE YANPQRCP
Sbjct: 181 AHTLAKLATPFGEQDVLRIASVSHPEYVGRVASFFRQIGARGLLMHGTEGEAYANPQRCP 240

Query: 241 QISLIDAAGTRVVNER--QDGAAEQALVLPASKDPEVTARWIEHCSVGSEPLPQSLKIQL 298
           QI  I     +V+ ER  QD   E    LPA+KD E TARW E C  G   +P +++ Q+
Sbjct: 241 QIHYIVNGEQQVLLERPEQDPTPE----LPAAKDAETTARWTERCLAGDVAIPLAIQRQI 296

Query: 299 ACCLVATGVVASLEQGLAKV 318
           ACCL+A G V +LEQGL ++
Sbjct: 297 ACCLLAAGEVDTLEQGLERL 316