Pairwise Alignments

Query, 322 a.a., DNA-binding protein YbiB from Klebsiella michiganensis M5al

Subject, 320 a.a., DNA-binding protein YbiB from Escherichia coli ECRC101

 Score =  523 bits (1347), Expect = e-153
 Identities = 254/322 (78%), Positives = 285/322 (88%), Gaps = 2/322 (0%)

Query: 1   MDYSKIIKEVGRGKNHARDLDVETARALYSRMLNGEVPELELGGILIALRIKGEGEAEMK 60
           MDY KIIKE+GRGKNHARDLD +TAR LY+ MLNGEVP+LELGG+LIALRIKGEGEAEM 
Sbjct: 1   MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEML 60

Query: 61  GFYEAMQNHTMKLTPPIAKPMPIVIPSYNGARKQANLTPLLAVLLHKLGFPVIVHGVSHD 120
           GFYEAMQNHT+KLTPP  KPMPIVIPSYNGARKQANLTPLLA+LLHKLGFPV+VHGVS D
Sbjct: 61  GFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED 120

Query: 121 PTRVLTETIFELMGIPATLQAGQAQARLDSHQPVYVPVGALCPPLEKQLAMRWRMGVRNS 180
           PTRVLTETIFELMGI  TL  GQAQA+LD HQPV++PVGA CPPLEKQLAMRWRMGVRNS
Sbjct: 121 PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS 180

Query: 181 AHTLAKLATPFAEDAALRLSSVSHPEYVGRVAKFFAEIGGRALLMHGTEGEVYANPQRCP 240
           AHTLAKLATPFAE  ALRLSSVSHPEY+GRVAKFF++IGGRALLMHGTEGEVYANPQRCP
Sbjct: 181 AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP 240

Query: 241 QISLIDAAGTRVVNERQDGAAEQALVLPASKDPEVTARWIEHCSVGSEPLPQSLKIQLAC 300
           QI+LID    RV+ E+QD A  +  +LP +KDPE TA+WI+ C  G EP+P+SLKIQ+AC
Sbjct: 241 QINLIDREEMRVLYEKQDPAGSE--LLPQAKDPETTAQWIQRCLAGREPIPESLKIQMAC 298

Query: 301 CLVATGVVASLEQGLAKVAESW 322
           CLVATG  A++  GLA+V +++
Sbjct: 299 CLVATGEAATISDGLARVNQAF 320