Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

Subject, 702 a.a., Excinuclease ABC subunit B from Variovorax sp. SCN45

 Score =  848 bits (2190), Expect = 0.0
 Identities = 430/669 (64%), Positives = 532/669 (79%), Gaps = 6/669 (0%)

Query: 4   PFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVL 63
           PF+L   + P+GDQP+AI  L EG+ DG   QTLLGVTGSGKT+T+ANVIA L RP +V 
Sbjct: 32  PFELFQPYPPAGDQPKAIEGLVEGVIDGEVFQTLLGVTGSGKTYTMANVIARLGRPAIVF 91

Query: 64  APNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMR 123
           APNKTLAAQLY E +EFFP+NAVEYFVSYYDYYQPEAYVP  D FIEKD+S+NEHIEQMR
Sbjct: 92  APNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQMR 151

Query: 124 LSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYTR 183
           LSATK++LERRD V+VA+VSAIYG+G P+ Y++M L   VG  + QR ++ RL  +QY R
Sbjct: 152 LSATKSVLERRDTVIVATVSAIYGIGTPEDYMEMRLIARVGDKVGQRDLISRLIRMQYLR 211

Query: 184 NDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHIESTIPRFTV 243
           N+Q F RGTFRVRG+ ID+FPAE  ++A+R ELFD+E+E L LFDPLTG I   +PRFTV
Sbjct: 212 NEQDFARGTFRVRGDTIDVFPAEHSELAIRFELFDDEIESLQLFDPLTGRIRQKVPRFTV 271

Query: 244 YPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNELGYC 303
           YP +HYVTPR++++ A+E IK+ELA R K L+   KL+E QRL QRT+FDLEM+ E+G+C
Sbjct: 272 YPSSHYVTPRDKVMAAVETIKIELAGRLKELVGAGKLVEAQRLEQRTRFDLEMLAEIGHC 331

Query: 304 SGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKETLVE 363
            GIENY+R+LSG  PG+PP TL DYLP D L+ +DESH  + Q+  MY GDRARK TLVE
Sbjct: 332 KGIENYTRHLSGAAPGDPPATLTDYLPKDALMFLDESHQMVGQLSAMYNGDRARKTTLVE 391

Query: 364 YGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLDPII 423
           YGFRLPSALDNRP+K EEFEA   Q I+VSATP  YE D +G+ VV+Q+VRPTGL+DP +
Sbjct: 392 YGFRLPSALDNRPLKMEEFEARVRQCIFVSATPAQYEKDHAGN-VVEQLVRPTGLIDPEV 450

Query: 424 EVRPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTV 483
           EVRP   QVDD+L EIR+R   NERVL+TTLTKRM+E LT+YL ++G +VRYLHSD+DTV
Sbjct: 451 EVRPATHQVDDVLGEIRVRVEKNERVLITTLTKRMSEQLTDYLGDNGVKVRYLHSDVDTV 510

Query: 484 ERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 543
           ER+EI+RDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLR+ERSLIQTIGRAA
Sbjct: 511 ERVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAA 570

Query: 544 RNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALGQNI 603
           RN+NGKAILY D++T SM KAI ETERRR +Q A+NE +GI P+ + K+V D++     +
Sbjct: 571 RNLNGKAILYADRMTDSMKKAIDETERRRARQIAHNEANGITPRSIVKQVRDLI---DGV 627

Query: 604 AKTKTKGRGKSRSPVE-ADTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQ 662
              KT G+  ++  +E A    ++ K + ++I  LE QM++HA+NLEFE+AA++RDQL  
Sbjct: 628 YSEKT-GKEMAKLDLERAKVEDMSEKDIAREIKRLEKQMLEHARNLEFEKAARVRDQLAL 686

Query: 663 LRELFIAAS 671
           LRE    A+
Sbjct: 687 LREQAFGAA 695