Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

Subject, 697 a.a., excinuclease ABC subunit UvrB from Paraburkholderia sabiae LMG 24235

 Score =  869 bits (2246), Expect = 0.0
 Identities = 438/668 (65%), Positives = 529/668 (79%), Gaps = 4/668 (0%)

Query: 4   PFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVL 63
           PF+L+  + P+GDQP AI  L EG+EDGL+ QTLLGVTGSGKT+T+AN IA L RP +V 
Sbjct: 25  PFRLYQPYPPAGDQPTAIETLVEGVEDGLSFQTLLGVTGSGKTYTMANTIARLGRPAIVF 84

Query: 64  APNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMR 123
           APNKTLAAQLY E +EFFP NAVEYFVSYYDYYQPEAYVP  D FIEKD+S+NEHIEQMR
Sbjct: 85  APNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQMR 144

Query: 124 LSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYTR 183
           LSATK+L+ERRDVV+VA+VSAIYG+G+P  Y +M+L L  G  + QR ++ RL  +QY R
Sbjct: 145 LSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILTLRTGDKLGQRDVIARLIAMQYNR 204

Query: 184 NDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHIESTIPRFTV 243
           N+  FQRG+FRVRG+ IDIFPAE  ++A+RVELFD+E++ L LFDPLTG +   IPRFTV
Sbjct: 205 NEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDDEIDTLQLFDPLTGRVRQKIPRFTV 264

Query: 244 YPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNELGYC 303
           YP +HYVTPRE +++A+E IK EL +R +    + KL+E QRL QRT+FDLEM+ ELG+C
Sbjct: 265 YPSSHYVTPRETVMRAVETIKSELRDRLEFFYNDGKLVEAQRLEQRTRFDLEMLQELGFC 324

Query: 304 SGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKETLVE 363
            GIENYSR+ SG  PGEPPPTL DYLP D ++ +DESHV I Q+ GMY GDRARKE LV+
Sbjct: 325 KGIENYSRHFSGAAPGEPPPTLVDYLPTDAMMFLDESHVLIGQLNGMYNGDRARKENLVD 384

Query: 364 YGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLDPII 423
           YGFRLPSALDNRP+KF EFE    Q ++VSATP  YE  K+  +V +QVVRPTGL+DP I
Sbjct: 385 YGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADYE-KKTAGQVAEQVVRPTGLVDPEI 443

Query: 424 EVRPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTV 483
            VRP  TQVDD+L+EI  R A  +RVLVT LTKRMAE LTE+L +HG +VRYLHSDIDTV
Sbjct: 444 AVRPARTQVDDVLAEINERVAAGDRVLVTVLTKRMAEQLTEFLADHGVKVRYLHSDIDTV 503

Query: 484 ERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 543
           ER+EIIRDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLR+ERSLIQTIGRAA
Sbjct: 504 ERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAA 563

Query: 544 RNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALGQNI 603
           RN+NGKAILY DKIT SM +AI ETERRR KQ A+NEE GIVP+G+ K++ DI+    N+
Sbjct: 564 RNVNGKAILYADKITDSMKRAIDETERRRAKQMAFNEERGIVPRGVVKRIKDIIDGVYNV 623

Query: 604 AKTKTKGRGKSRSPVEADTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQL 663
            + + +        V A    ++ K L +++  LE QMM+HA+NLEFE+AAQ+RDQL  L
Sbjct: 624 DEARAE---LKEQQVRAKFEDMSEKQLAKELKRLEKQMMEHAKNLEFEKAAQMRDQLALL 680

Query: 664 RELFIAAS 671
           R+    A+
Sbjct: 681 RQRVFGAN 688