Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

Subject, 673 a.a., excinuclease ABC subunit UvrB from Escherichia coli ECRC98

 Score = 1246 bits (3224), Expect = 0.0
 Identities = 638/673 (94%), Positives = 652/673 (96%), Gaps = 2/673 (0%)

Query: 1   MSKPFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT 60
           MSKPFKL+SAF+PSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
Sbjct: 1   MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT 60

Query: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120
           MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ 180
           QMRLSATKA+LERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
Sbjct: 121 QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ 180

Query: 181 YTRNDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHIESTIPR 240
           Y RNDQAFQRGTFRVRGEVIDIFPAESDD+ALRVELFDEEVERLSLFDPLTG I STIPR
Sbjct: 181 YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR 240

Query: 241 FTVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNEL 300
           FT+YPKTHYVTPRERIVQAMEEIK ELA RRKVLLENNKLLEEQRL+QRTQFDLEMMNEL
Sbjct: 241 FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL 300

Query: 301 GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET 360
           GYCSGIENYSR+LSGRGPGEPPPTLFDYLPADGLLV+DESHVTIPQIGGMYRGDRARKET
Sbjct: 301 GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET 360

Query: 361 LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLD 420
           LVEYGFRLPSALDNRP+KFEEFEALAPQTIYVSATPG YEL+KSG +VVDQVVRPTGLLD
Sbjct: 361 LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD 420

Query: 421 PIIEVRPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI 480
           PIIEVRPV TQVDDLLSEIR R AINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
Sbjct: 421 PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI 480

Query: 481 DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540
           DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
Sbjct: 481 DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540

Query: 541 RAARNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALG 600
           RAARN+NGKAILYGDKITPSMAKAIGETERRREKQQ YNEEHGI PQGLNKKVVDILALG
Sbjct: 541 RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG 600

Query: 601 QNIAKTKTKGRGKSRSPVEADTVA--LTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD 658
           QNIAKTK KGRGKSR  VE D V   ++PKALQQKIHELEG MMQHAQNLEFEEAAQIRD
Sbjct: 601 QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD 660

Query: 659 QLHQLRELFIAAS 671
           QLHQLRELFIAAS
Sbjct: 661 QLHQLRELFIAAS 673