Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Klebsiella michiganensis M5al

Subject, 988 a.a., excinuclease ABC subunit B from Agrobacterium fabrum C58

 Score =  762 bits (1968), Expect = 0.0
 Identities = 389/664 (58%), Positives = 485/664 (73%), Gaps = 1/664 (0%)

Query: 6   KLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAP 65
           ++ S ++P+GDQP AI  L EG+  G   Q LLGVTGSGKTFT+A VI   QRP ++LAP
Sbjct: 172 RMDSEYQPAGDQPTAIADLVEGINSGERSQVLLGVTGSGKTFTMAKVIEATQRPAVILAP 231

Query: 66  NKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLS 125
           NKTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAYVP SDTFIEK++S+NE I++MR S
Sbjct: 232 NKTLAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHS 291

Query: 126 ATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYTRND 185
           AT++LLER D ++VASVS IYG+G  + Y  M   + VG  +DQR +L  L   QY R D
Sbjct: 292 ATRSLLERDDCIIVASVSCIYGIGSVETYTAMTFQMQVGDRLDQRQLLADLVAQQYKRRD 351

Query: 186 QAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHIESTIPRFTVYP 245
             FQRG+FRVRG+ I+IFPA  +D A R+ +F +E++ ++ FDPLTG     +    +Y 
Sbjct: 352 MDFQRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLQSVKIYA 411

Query: 246 KTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNELGYCSG 305
            +HYVTPR  +  A++ IK EL  R   L +  +LLE QRL QRT++D+EM+   G C+G
Sbjct: 412 NSHYVTPRPTLNGAIKSIKEELKVRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCAG 471

Query: 306 IENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKETLVEYG 365
           IENYSRYL+GR PGEPPPTLF+Y+P + LL IDESHV++ QIGGMYRGD  RK TL EYG
Sbjct: 472 IENYSRYLTGRNPGEPPPTLFEYIPDNALLFIDESHVSVSQIGGMYRGDFRRKATLAEYG 531

Query: 366 FRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLDPIIEV 425
           FRLPS +DNRP++FEE++A+ P T+ VSATPG++E+++SG    +QV+RPTGL+DP +EV
Sbjct: 532 FRLPSCMDNRPLRFEEWDAMRPLTVAVSATPGSWEMEQSGGVFAEQVIRPTGLIDPPVEV 591

Query: 426 RPVGTQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVER 485
           R   +QVDD+L EIR   A   R L T LTKRMAEDLTEYL E G RVRY+HSDIDT+ER
Sbjct: 592 RSARSQVDDVLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLER 651

Query: 486 MEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARN 545
           +EIIRDLRLG FDVLVGINLLREGLD+PE   VAILDADKEGFLRSE SLIQTIGRAARN
Sbjct: 652 IEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARN 711

Query: 546 INGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALGQNIAK 605
           ++GK ILY D IT SM +A+ ET RRREKQ AYN EHGI P+ +  K+ DIL        
Sbjct: 712 VDGKVILYADNITGSMKRAMEETSRRREKQMAYNAEHGITPESVKAKISDILDSVYERDH 771

Query: 606 TKTKGRGKSRSPVEADTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRE 665
            +    G S     AD   L    LQ  ++ LE  M   A +L+FE+AA++RD++ +L+ 
Sbjct: 772 VRADISGVSGKGF-ADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKA 830

Query: 666 LFIA 669
             +A
Sbjct: 831 AELA 834