Pairwise Alignments

Query, 554 a.a., choline dehydrogenase from Klebsiella michiganensis M5al

Subject, 572 a.a., Choline dehydrogenase (EC 1.1.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  381 bits (978), Expect = e-110
 Identities = 229/545 (42%), Positives = 307/545 (56%), Gaps = 21/545 (3%)

Query: 3   FDYIIIGAGSAGNVLATRLTEDPDTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 62
           FDYII+G GSAG VLA RL+EDP T V LLEAG PD         PA LA   +  + NW
Sbjct: 2   FDYIIVGGGSAGCVLAARLSEDPATRVALLEAGPPDR--SVLIHCPAGLALLAKNGQANW 59

Query: 63  AYETEPEPHMNHRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWASAPGLEHWSYLDCL 122
             +T P+P +N RR    RGK LGGSS +N M Y RG+A D D WA A G   WS+ + L
Sbjct: 60  GLQTVPQPGLNGRRGYQPRGKVLGGSSSVNAMIYARGHASDYDGWA-AQGNPGWSFDEVL 118

Query: 123 PYYRKAETRDIGANDYHGGDGPVSVTTPKQGNNPLFHAMIEAGVQAGYPRTDDLNGYQQE 182
           PY+++AE  + GA+ +HG  GP++V   +  N P   A ++AG QAGY R  D NG +QE
Sbjct: 119 PYFKRAEHNERGADAWHGQGGPLNVMDLRSPN-PFLPAFLDAGEQAGYRRNADFNGPEQE 177

Query: 183 GFGPMDRTVTPQGRRASTARGYLDQARARPNLTIRTHALTDHIIF-----AGKRAVGVEW 237
           G G    T    G R S A+ YL     RPNL + T ALT  ++         RAVGVE+
Sbjct: 178 GIGAYQVT-HKNGERHSAAKAYLTPHLDRPNLRVITDALTLRVVTDTDEDGTVRAVGVEY 236

Query: 238 LEGDSTAPSKATANKE---VLLCAGAIASPQILQRSGVGSPELLRQFDISLVHALPGVGE 294
                  P +    KE   V+L AGA  SPQ+L  SG+G    LR+  I+ VH LPGVG+
Sbjct: 237 RGNGGRGPLQILRLKEGGEVVLSAGAFGSPQLLMLSGIGPAAQLREHGIAPVHDLPGVGQ 296

Query: 295 NLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGA---EWLFGGTGIGASNQFEAGGFIRS 351
           NL DH+++ +         L+  L      ++     EW    +G+  +N  EAGGFI+S
Sbjct: 297 NLHDHVDVVMVVNAPRIKDLF-GLSLTGVARVVRGIFEWRRRRSGMLTTNFAEAGGFIKS 355

Query: 352 REAFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRLKSRDPHQHPAIL 411
             A   P++Q HF+   +  +G   V  HG+ CHV  +R  SRG +RL S DP   P I 
Sbjct: 356 SPAEPIPDLQLHFVVGKLVDHGRKTVFGHGYSCHVCLLRPRSRGSLRLASADPLAPPLID 415

Query: 412 FNYMSHEQDWQEFRDAIRITREIMSQPALDNYRGREISPGIECQSDAELDEFVRNHAETA 471
             ++    D        +  RE++ QPAL  + G E +   + QSDA++++F+R+HA+T 
Sbjct: 416 PAFLQDADDTARLVQGFKRMRELLQQPALTRHGGTESAASAQAQSDAQIEQFIRDHADTI 475

Query: 472 FHPCGTCKMGYD----EMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKM 527
           +HP GTC+MG D     + VVD   RVHG+ GLRVVDAS+MP ++ GN NA  IM+ EK 
Sbjct: 476 YHPVGTCRMGPDGAPGGLDVVDARLRVHGVAGLRVVDASVMPSVVGGNTNAPVIMMAEKA 535

Query: 528 ADAIR 532
            D +R
Sbjct: 536 VDMMR 540