Pairwise Alignments

Query, 359 a.a., RND transporter MFP subunit from Klebsiella michiganensis M5al

Subject, 385 a.a., RND efflux system, membrane fusion protein CmeA from Pseudomonas fluorescens GW456-L13

 Score =  164 bits (415), Expect = 4e-45
 Identities = 120/369 (32%), Positives = 183/369 (49%), Gaps = 13/369 (3%)

Query: 2   NKIIRSALLACGLAGYAL-----AAAAAPAVPVRVVTVEQAPHAGERQISGRVEAIHSVD 56
           N + R +L+A  L   A      A   AP   VR+ T+E  P     ++SGR+ A    +
Sbjct: 4   NLLARLSLIALALTLGACDKSSNAEEQAPLATVRIETIEARPLTISSELSGRIAAPRMAE 63

Query: 57  IRARTEGKIVQRHFQDGQYVNQGDLLFTLDDAQPKAALALAQAELKSAQASLRQAQQLLS 116
           +RAR  G ++QR F++G  V QG++LF +D A  KA L  A+A L+ A+A+  QA+    
Sbjct: 64  VRARVAGVVLQRTFREGSDVKQGEVLFRIDPAPFKADLDSAEAALRKAEANAFQARLQEQ 123

Query: 117 RYQQLINNHAIGRNDLDTAQMQRDVAAAAVEQARARIAAQQITLGYTRITSPVSGRVGHS 176
           RY +LI++ AI   D D A+      AA V   +A +   ++ LGY  +T+P+SGR+G +
Sbjct: 124 RYARLIDDKAISGQDYDNARANARQTAADVAGNKAAVERARLNLGYATVTAPISGRIGRA 183

Query: 177 PFHVGSLVNP-ASGVLVDVVQLDPIRVAFS-----LDETVFFAKAGQHTDIAA-LKEAWL 229
               G+LV    +  L  + QL+PI    +     L+E     ++GQ   +     +A L
Sbjct: 184 LVTEGALVGQNETTPLALIQQLNPIHADLTQSTRELNELRRAFRSGQLQQVGQDQAKATL 243

Query: 230 AQVDVDGRREDGVLTSVDNRIDSRTASVALRAEFANPQHRLLPGGNVTIFFRPRQLQESP 289
            Q D       G +   D  +D  T  + LR+EF NP   LLPG  V +       Q+  
Sbjct: 244 IQDDGSLYPLPGKMLFSDITVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAINQQGI 303

Query: 290 MIPAAAMQQDAQGFYS-WVLTADNTVTMRRLTPAGQQGQQFAVAEGLLPGERVVTEGAQR 348
            +P  A+Q+D+ G     +L A+  V  R +     Q  ++ V  GL  G+R+V EG Q 
Sbjct: 304 SVPQRAIQRDSAGIAQVLLLDAEQRVGQRPVELGAVQNDRWIVTGGLKAGDRIVIEGLQH 363

Query: 349 LRDGAAVQL 357
            R G  VQ+
Sbjct: 364 ARPGEKVQI 372