Pairwise Alignments

Query, 279 a.a., antitermination protein BlgG from Klebsiella michiganensis M5al

Subject, 278 a.a., transcriptional antiterminator BglG from Escherichia coli ECRC62

 Score =  172 bits (435), Expect = 1e-47
 Identities = 94/276 (34%), Positives = 162/276 (58%), Gaps = 6/276 (2%)

Query: 1   MIVQKVLNNSLVLSMDDDSREVIVMGKGIGFNSRPGDEIAPDKIEKLFVTQALGARSGYL 60
           M + K+LNN++V+ +DD  RE +VMG+GIGF  R G+ I    IEK +   +        
Sbjct: 3   MQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLS 62

Query: 61  EALSAIPDEVIEMAAMIISRANMQLASKVREQIFFTLADHLTFAIERSRKGIAIQNRLLP 120
           E LS IP EV+     IIS A  +L  K+++ I+ +L DH  FAI+R ++ + + N LL 
Sbjct: 63  ELLSHIPLEVMATCDRIISLAQERLG-KLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLW 121

Query: 121 EVRRFYPQQFRVASEAVTIIRQQYGIELPEEEAGNIAFHLVNGQSEG--DDVAQTMQSVK 178
           +++R YP++F++  EA+TII ++ G++LP++E G IA HLV+ Q  G  +DVA   Q   
Sbjct: 122 DIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQ--- 178

Query: 179 MLKDIFNLVQYHFKQPIDTDSINYSRFLVHMQFFLQRLQEGELDGARDSFLLVQVIKEYP 238
           +++++  L+++ F      +S++Y R + H++F   R+ E       D  L   V + YP
Sbjct: 179 LMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYP 238

Query: 239 EAYRCALLIRDYVKAQLDITLGGNELLWLTVHLVRI 274
           +A++CA  I  ++  Q    +   E+++L +++ R+
Sbjct: 239 QAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERV 274