Pairwise Alignments

Query, 592 a.a., multidrug ABC transporter permease/ATP-binding protein from Klebsiella michiganensis M5al

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Pectobacterium carotovorum WPP14

 Score =  272 bits (696), Expect = 2e-77
 Identities = 187/579 (32%), Positives = 305/579 (52%), Gaps = 20/579 (3%)

Query: 8   WPTLKRLLAYGSPWRKPLMIAVAIMWVAAVAEVSGPLLISYFIDNMVAKNSLPLKLVCGL 67
           W T +RL    SP++  L +A   + + A  +     L+   +D+   K    + +   L
Sbjct: 10  WQTFRRLWPMISPFKAGLAVAAIALIINAAGDTLMLSLLKPLLDDGFGKAERAVLIWMPL 69

Query: 68  AVAYIGLQLL--AAGL--HYCQALLFNRAAVGVVQQLRSDVMDAALRQPLSEFDTQPVGQ 123
           AV  IGL L+   +G    YC A +  +  + + ++L S +M      P+S FD Q  G 
Sbjct: 70  AV--IGLMLMRGVSGFISSYCVAWVSGKVVMNMRRRLFSHIMG----MPVSFFDQQSTGT 123

Query: 124 LISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIAIFPAVLIVMM 183
           L+SR+T D+E +       + TV+R  A I  + + MF   W+++++ I I P V I M 
Sbjct: 124 LLSRITYDSEQVAASASGALITVVREGASIIGLFILMFYYSWQLSIILIVIAPIVSIAMR 183

Query: 184 IYQRYSTPIVRRVRAWLADINDGFNEVINGMGVIQQFRQQARFGERMREASYAHYLARMQ 243
           +  +    I + ++  +  +     +++ G   +  F  Q    +R  + S      R Q
Sbjct: 184 VVSKRFRNISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFDQVSNR---MRQQ 240

Query: 244 TLRL--DGFLLRPLLSLFSSLILCGLLMLFGFSS-SGTIEVGVLYAFISYLGRLNEPLIE 300
            ++L     +  P++ L +SL L  +L    F S   T+  G +    S +  L  PL  
Sbjct: 241 GMKLVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS 300

Query: 301 LTTQQSMLQQAVVAGERVFELMDKPRQA-WGEDSEPLRSGAISIDHLSFAYRD-DSLVLQ 358
           LT   +  Q+ + A + +F ++D  ++   G+       G +    ++FAY   ++L L+
Sbjct: 301 LTNVNAQFQRGMAACQTLFAILDMEQERDTGKREIERAKGELEFRQVNFAYPGKENLALK 360

Query: 359 DINLDIPSRSFVALVGHTGSGKSTLASLMMGYYPLTQGEIRIDGRPLSSLSHSALRQGIA 418
           +INL IP+   VALVG +GSGKST+ASL+  +Y +  GEI +DG  L     S+LR  +A
Sbjct: 361 NINLHIPAGKTVALVGRSGSGKSTIASLLTRFYDIQSGEILLDGHDLREYRLSSLRNQVA 420

Query: 419 MVQQDPVVLADTFYANVTLGRD--ISEEQVWEALEAVQLADLAREMENGIYTQLGEQGNN 476
           +V Q+  +  DT   N+   R+   S E++  A +     D   +M++G+ T +GE G  
Sbjct: 421 LVSQNVHLFNDTIANNIAYARNEHYSREEIERAAKMAHAMDFINKMDHGLDTVIGENGVM 480

Query: 477 LSVGQKQLLALARVLVDTPQVLILDEATANIDSGTEQAIQQALARVREHTTLVVIAHRLS 536
           LS GQ+Q +A+AR L+    +LILDEAT+ +D+ +E+AIQ AL  +++  T VVIAHRLS
Sbjct: 481 LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDRTAVVIAHRLS 540

Query: 537 TIVEADTILVLHRGQAVERGNHQQLLAAKGRYWQMYQLQ 575
           TI +AD ILV+  G+ +ERGNH  LLAA G Y Q++++Q
Sbjct: 541 TIEKADEILVIEDGRIIERGNHAALLAANGAYAQLHRMQ 579