Pairwise Alignments

Query, 1160 a.a., DNA polymerase III subunit alpha from Klebsiella michiganensis M5al

Subject, 1428 a.a., DNA-directed DNA polymerase III (polc) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  674 bits (1739), Expect = 0.0
 Identities = 422/1208 (34%), Positives = 657/1208 (54%), Gaps = 86/1208 (7%)

Query: 1    MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA 60
            + +  F HL VH+ YS++   ++   +V +A    MPA+A+TD  N+     F  A    
Sbjct: 240  LVDTPFSHLHVHTQYSILQATSEIPAMVARAKEFNMPAIAMTDHGNMMAAFHFVKAAMDN 299

Query: 61   GIKPIVGADFHV----QSDLLGDELSQLTVLAANNAGYQNLTLLISKAYQRGYGAAGPII 116
             IKP+VG +F++    Q+    D+  Q  +LA N  GY NL  L S AY +G+    P I
Sbjct: 300  DIKPVVGCEFNICRDHQNKSQKDDGFQAVLLAKNKTGYHNLAKLASFAYTQGFYYV-PRI 358

Query: 117  DRDWLIELKEGLILLSGGRMGDVGRSLLRGNMALVDQCVDFYEQHFPDCYFLELIRTGRQ 176
            D++ L++ K  +I  +GG  G+V   +L       ++   ++++ F + +++EL R G  
Sbjct: 359  DKELLVQYKGDIIATTGGLWGEVPFLILNVGETQAEEAFVWWKEQFGEDFYVELNRHGIP 418

Query: 177  DEEPYLHAAVGLAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKR-----P 231
            +EE      +  A+   +   A N+  +    D  AH+I + + DG  +D PKR      
Sbjct: 419  EEEKVNEVLLRFAQKYDVKYFAANNTYYNTKNDAKAHDILLCVKDGEKVDKPKRYIGKKG 478

Query: 232  RNY-----SPQQYMRSEEEMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPT--- 283
            R +     + + Y+++ EEM +LF+D+PEA++ T EI ++        E  LP+F     
Sbjct: 479  REFRYGFPNEEFYIKTPEEMKKLFADLPEAIECTNEIIEKVEPYKLAREVLLPKFNIPEQ 538

Query: 284  ----------GDMTTEDYLVKKSKEGLEERLEFLFPDPDERTKRRPEYDERLDIELQVIN 333
                      G      YL   + EG + R    +P+  E      E  ERLD EL +I 
Sbjct: 539  FQDPQDDEDGGKRGENAYLRHLTYEGAKRR----YPEITE------EIRERLDFELSIIA 588

Query: 334  QMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLN 393
              G+PGYFLIV +F   +++ GV VGPGRGS AGS VAY + IT++DP+ +DLLFERFLN
Sbjct: 589  NTGYPGYFLIVQDFTTAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPVAYDLLFERFLN 648

Query: 394  PERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPY 453
            P+RVS+PD D+DF    R +VI++V + YG + V+QIIT+GTMAAK+ IRD  R L  P 
Sbjct: 649  PDRVSLPDIDIDFDDHGRQKVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARALDLPL 708

Query: 454  GFVDRISKLVPP-----------DPGMTLAKAFEAEPQLPEIYE------ADEEVKALID 496
               DR++KLVP            D G    K       + + YE       ++++   I+
Sbjct: 709  SDADRLAKLVPDIKLKALFGLANDRGKLAEKLKNNSENIDKAYELINISKGNDDLSKTIN 768

Query: 497  MARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQFDKNDVEYAGLVKFDF 556
             A+ LEG  RN G HA GV+I P  IT+F P+   +      TQFD + VE AGL+K DF
Sbjct: 769  QAKILEGSVRNTGIHACGVIITPDDITNFVPVALAKDSDMYCTQFDNSVVENAGLLKMDF 828

Query: 557  LGLRTLTIINWALEMINARREKNGEGPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGM 616
            LGL+TLT+I  A+ ++   +E++G   LD    P+DDK+++++ QR ET  +FQ ES GM
Sbjct: 829  LGLKTLTLIKDAVRIV---KERHGI-ELDPENFPIDDKETYELFQRGETVGIFQYESPGM 884

Query: 617  KDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHECLKPV 676
            +  ++ L+P  F D+IA+ AL+RPGPL+   + +FI RKHG E I+Y       + ++  
Sbjct: 885  QKYMRELKPTVFADLIAMNALYRPGPLE--YIPSFIKRKHGLEPIAY-----DLDDMEEY 937

Query: 677  LEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEMAKQRGTFEEGARKRGV 736
            L+ TYGI +YQEQVM ++Q+L+G+T G AD+LR+AMGKK  + + K +  F   A ++G 
Sbjct: 938  LQETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKLRDVLDKMKPKFVNQAAEKGH 997

Query: 737  DGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEK 796
            D     KI+   E FA Y FNKSHS  YA V+YQT +LKAHYPAE+MA+V++ +M++  +
Sbjct: 998  DKAKLEKIWKDWEAFASYAFNKSHSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMNDITQ 1057

Query: 797  VVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNQG 856
            V   ++EC RMG+++L PD+N     F VN +G+I +G+ AIKG G   + ++IE R + 
Sbjct: 1058 VTFFMEECKRMGIEVLGPDVNESKDGFTVNQEGQIRFGLAAIKGAGGAAVHSVIEERAEN 1117

Query: 857  GYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRL-GPHRAALMNS-------LGDALKA 908
            G ++ +FD   R +++ +N++ LE L M+G FD     HR   + +       +  A+K 
Sbjct: 1118 GPYKSIFDFTQRVNLRSVNKKTLESLAMAGGFDCFPDHHRRQYLEAPENDATLIEKAVKY 1177

Query: 909  ADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQPWPEQVVLDGERETLGLYLTGHPINQ 968
            A + A+     Q  +FG      E    S    +P+ +   L+ E+E +GLY++GHP++Q
Sbjct: 1178 AQKKAQEAESSQVSLFGG-GSGMEVPMPSITPIEPFSQLQQLNIEKEVVGLYISGHPLDQ 1236

Query: 969  YLKEIERYVGGVRLKDMHPTDRGKV---TTAAGLVIAARVMVTKRGNRIGICTLDDRSGR 1025
            +  E + +     L +   T+  K      AAG+V +     TK GN  G  TL+D +G 
Sbjct: 1237 FKVEFDSFT-NTPLSEFANTEALKTKGEIKAAGVVTSFAHRTTKNGNPFGTLTLEDYNGG 1295

Query: 1026 LEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFS-GGLKMTAREVMDIDEAREKYARGL 1084
                LF +   KY++       L V+G V    ++   L+     +M ++E R K  +GL
Sbjct: 1296 HTFFLFGEDYIKYKEYFMTGWFLYVTGSVQGKRWNPDELEFKVGNIMLLNEVRGKMVKGL 1355

Query: 1085 AISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRF---GATWRVSPSDR 1141
             ++++   +   L+ RL      ++       LY    D + R+        + + PS  
Sbjct: 1356 RLNISLDDLTLDLMERLEAITSKYKG---EAKLYINVTDVKERIAVDLRSTKFLIDPSQD 1412

Query: 1142 LLNDLRGL 1149
            ++  L  +
Sbjct: 1413 MIKALEDI 1420