Pairwise Alignments

Query, 495 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Klebsiella michiganensis M5al

Subject, 518 a.a., UDP-N-acetylmuramoyl-dipeptide--2,6-diaminopimela te ligase (EC 6.3.2.13) from Variovorax sp. SCN45

 Score =  293 bits (751), Expect = 8e-84
 Identities = 196/514 (38%), Positives = 270/514 (52%), Gaps = 41/514 (7%)

Query: 9   LLAPWVPN-APERILREMTLDSRVAASGDLFVAVLGHQADGRRYIPQAIAQGVAAIIAE- 66
           L+A W+   AP+     M  DSR   +GD+FVA  G   DGR+++  A+AQG A  + E 
Sbjct: 9   LVAAWLKERAPQAA---MHADSRAVGAGDIFVAWPGAATDGRKHVASALAQGAAVCLVEH 65

Query: 67  --AKDEAHDGEIREMHGVPVIYLSQLNERLSALAGRFYHQPSEQLRLVGVTGTNGKTTTT 124
              +    DG+ R      ++    L      +A  FY  PS  L ++ VTGTNGKT+T 
Sbjct: 66  EGVEPFGFDGDER------IVSYPGLKAATGPIASAFYDNPSALLDVLAVTGTNGKTSTA 119

Query: 125 QLLAQWAQLLGETS-------------------AVMGTVGNGLLEKVIPTENTTGSAVDV 165
             LA+    L                       AVMGT+G G+  ++  T  TT   V +
Sbjct: 120 WWLAESLSTLRAAGGVRVMKPDGTMQRDAPSPCAVMGTLGVGVPPELTYTGLTTPDPVMM 179

Query: 166 QHVLSGLAGQGATFAAMEVSSHGLVQHRVAALQFAASVFTNLSRDHLDYHGDMEHYEAAK 225
           Q  L  L  +G    A+E SS G+ + R+   Q A +VFTN ++DHLDYHG M+ Y  AK
Sbjct: 180 QRELRSLVERGFGACAIEASSIGIAERRLDGAQIAVAVFTNFTQDHLDYHGSMDAYWQAK 239

Query: 226 WLLYSTHHCGQAIVNADDEVGRRWLAKLPDAVAVSMEDHINPNCRGRWLKATAVNYHDSG 285
             L+       A++N DD  G    A L DA  +   D    +  G+  +  A +     
Sbjct: 240 AELFRWPGLRAAVINIDDTHGASLCANLIDA-GIGALDVWTVSAGGKPARLVARDIGYDA 298

Query: 286 ATIQFA-SSWGNGEIE---SRLMGAFNVSNLLLALATLLALGYPLAELLKTAARLQPVCG 341
             +QF+ +  G   +E   + L+G +NV+NLL  L TL ALG  LA+     A L  V G
Sbjct: 299 QGLQFSVAEHGTAAVERLSTGLIGQYNVANLLGVLGTLRALGLTLAQAAAACANLTSVPG 358

Query: 342 RME-VFSAPGKPTVVVDYAHTPDALEKALQAAR---LHCNGKLWCVFGCGGDRDKGKRPL 397
           RM+   +  G P  VVDYAHTPDAL+KAL   R       G LWC+FGCGGDRD  KRP+
Sbjct: 359 RMDRAGTGDGAPLAVVDYAHTPDALDKALIGLRPLAQQRGGALWCLFGCGGDRDPIKRPM 418

Query: 398 MGAIAEEFADIVVVTDDNPRTEEPRAIINDILAGMLDAGHAKAVEGRAEAVTNAVMQAKE 457
           M A+AE  AD V+VT DNPR+E+P AII+ +L G      A+    RA A+ +A+ QA  
Sbjct: 419 MAAVAERQADRVIVTSDNPRSEKPDAIISQVLLGFSRPEVAQVQPDRALAIADAIAQAAP 478

Query: 458 NDVVLVAGKGHEDYQIVGNRRLDYSDRVTVARLL 491
            DVVL+AGKGHE +Q +  +R+++SD+    + L
Sbjct: 479 QDVVLIAGKGHEAWQEIAGQRIEFSDKTHALQAL 512