Pairwise Alignments

Query, 785 a.a., DNA polymerase II from Klebsiella michiganensis M5al

Subject, 783 a.a., DNA polymerase II (NCBI) from Escherichia coli BW25113

 Score = 1360 bits (3520), Expect = 0.0
 Identities = 649/781 (83%), Positives = 710/781 (90%)

Query: 5   RAGFLLTRHWRDTPQGTELTFWLATDDGPLEVTLPPQESVAFIAESQRPQVERLLQGENG 64
           +AGF+LTRHWRDTPQGTE++FWLATD+GPL+VTL PQESVAFI   Q P+ + +LQGE G
Sbjct: 3   QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62

Query: 65  HRLAALNLQDFHRQPVFGLYCRAHRQLMRLEKKLRENGVTVYEGDIRPPERYLMERFITA 124
            RL  L L+DFHRQPV+GLYCRAHRQLM  EK+LRE GVTVYE D+RPPERYLMERFIT+
Sbjct: 63  FRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122

Query: 125 PVWVEGEARGQQLVNARMKPNPHYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLG 184
           PVWVEG+     +VNAR+KP+P YRPPLKWVS+DIET+RHGELYCIGLEGCGQR+VYMLG
Sbjct: 123 PVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLG 182

Query: 185 PEPATPPAVDFTLEYVASRPLLLEKLNAWFAAHDPDVLIGWNVVQFDLRVLQKHAERYRI 244
           PE     ++DF LEYVASRP LLEKLNAWFA +DPDV+IGWNVVQFDLR+LQKHAERYR+
Sbjct: 183 PENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRL 242

Query: 245 PLMLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFALESVARELLG 304
           PL LGR NSELEWREHGFKNGVFFAQA GRLIIDGIEALKSAFWNFSSF+LE+VA+ELLG
Sbjct: 243 PLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLG 302

Query: 305 EGKAIDNPWDRMDEIDRRFHHDKPALATYNLQDCELVTRIFHKTEIMPFLLERATVNGLP 364
           EGK+IDNPWDRMDEIDRRF  DKPALATYNL+DCELVT+IFHKTEIMPFLLERATVNGLP
Sbjct: 303 EGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLP 362

Query: 365 ADRHGGSVAAFSHLYFPRMHRLGYVAPNLGAVPPQASPGGYVMDSRPGLYDSVLVLDYKS 424
            DRHGGSVAAF HLYFPRMHR GYVAPNLG VPP ASPGGYVMDSRPGLYDSVLVLDYKS
Sbjct: 363 VDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKS 422

Query: 425 LYPSIIRTFLIDPVGLVEGLAHPDDAHSTEGFLGARFSREKHCLPGIVGQIWHGRDEAKQ 484
           LYPSIIRTFLIDPVGLVEG+A PD  HSTEGFL A FSREKHCLP IV  IWHGRDEAK+
Sbjct: 423 LYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKR 482

Query: 485 HKNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIESQGYDVI 544
             NKPLSQALKIIMNAFYGVLGT+ACRFFDPRLASSITMRGH IMRQTKALIE+QGYDVI
Sbjct: 483 QGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVI 542

Query: 545 YGDTDSTFVWLKRAHSDEEASSIGRSLVAFVNEWWAAELAKDGLASTLELEFETHFCRFL 604
           YGDTDSTFVWLK AHS+EEA+ IGR+LV  VN WWA  L K  L S LELE+ETHFCRFL
Sbjct: 543 YGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFL 602

Query: 605 MPTIRGADTGSKKRYAGMIQEADEQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRHQPY 664
           MPTIRGADTGSKKRYAG+IQE D+QRMVFKGLETVRTDWTPLAQQFQQELYLRIFR++PY
Sbjct: 603 MPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPY 662

Query: 665 RDYVRETIDKLMNGELDDRLVYRKRLRRPLAEYQRNVPPHVRAARLADEQNVRLGRPQQY 724
           ++YVRETIDKLM GELD RLVYRKRLRRPL+EYQRNVPPHVRAARLADE+N + GRP QY
Sbjct: 663 QEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQY 722

Query: 725 QQRGSIKYVWTTGGPEPVDYQQSPLDYEHYLSKQLEPVAEGILPFVDDDFATIVTGQLGL 784
           Q RG+IKYVWTT GPEP+DYQ+SPLDYEHYL++QL+PVAEGILPF++D+FAT++TGQLGL
Sbjct: 723 QNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGL 782

Query: 785 F 785
           F
Sbjct: 783 F 783