Pairwise Alignments

Query, 780 a.a., LPS assembly protein LptD from Klebsiella michiganensis M5al

Subject, 846 a.a., LPS-assembly protein LptD from Xanthobacter sp. DMC5

 Score = 88.2 bits (217), Expect = 2e-21
 Identities = 85/350 (24%), Positives = 151/350 (43%), Gaps = 62/350 (17%)

Query: 54  IDADHAKGNYPDNAVFT-GNVDINQGNSRLQADEVQLHQQQADGQPQPVRTVDALGNVHY 112
           + AD  + +Y  + V   GNV I    S L+A  V L ++          T+ A GN   
Sbjct: 86  VTADQLEYDYQKDTVSAVGNVQIYYDGSTLEARRVVLDRK--------ANTLRAEGNARL 137

Query: 113 DDNQVILKGPKAWSNLNTKDTNVWQGDYQM--VGRQGRGTAD------LMKQRGENRYTI 164
            D             + T DT     D++   +      T D      +   R +   T+
Sbjct: 138 KDKD---------GKIVTADTLQLTQDFKQGFIDSLRLDTPDNTHFAAVRADRTDGNITV 188

Query: 165 LENGSFTSCLPGSDT------WSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQL 218
            +NG +T+C P  D       W +   ++IH+ +E++    +A  +   +P+ Y PY+  
Sbjct: 189 FQNGIYTACEPCKDDPSKPPLWQIKAKKIIHNDDEKMVYYEDAWVEFFGLPVAYFPYMSS 248

Query: 219 PVGD-KRRSGFLIPNAKYSTKNGAEFYLPYYWNIAPNFDATLTPHYMSKRGGVMWENEFR 277
           P    KR++GFL+P    S++ G    +P++WNIAP+ D TLTP +++++ GV+ + E+R
Sbjct: 249 PDPTVKRKTGFLMPEFFSSSQIGYGVSVPFFWNIAPDRDLTLTPAFLTQQ-GVLMQAEWR 307

Query: 278 Y------LTKAGTGLIEFDYLPSDKI------------YQDDHSGDSNSRRWLFYWNHSG 319
                   T    G+++ +  P D I            Y++D     ++  +        
Sbjct: 308 QRLINGSYTIRAAGIVQQN--PQDFITTSNGITEVLPGYREDRGAVESTGAF-------- 357

Query: 320 VVDQVWRFNADYTKVSDPDYFNDFSSKYGSSTDGYATQKLSAGYANQNFD 369
            +++ W F  D T VSD  +  D++    ++T   +T  L+       FD
Sbjct: 358 ALNKFWTFGWDGTVVSDRTFLRDYNLIPDATTTKTSTVYLTGQGDRSYFD 407



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 82/328 (25%), Positives = 125/328 (38%), Gaps = 59/328 (17%)

Query: 430 VHFEPTINLPLSNGW----------GSINTEAKLLATHYQQSNLDDYNAANGTDYKDSVN 479
           V+++ TI  PL   W           S+NT + L A++         N        D + 
Sbjct: 508 VYWKKTITDPLGQQWTPFVTARVDVASVNT-SYLPASYQFGPTFPGQNPLQSGS--DDLI 564

Query: 480 RVMPQFKVDGKMVFERDMQENYTQTLEPRMQYLYIPYRDQSKIGTY---DSTLLQSDYSG 536
           R MP   +D K  F    +   TQT+EPR Q +  P  ++S IG +   D+  L  D + 
Sbjct: 565 RAMPAVGLDYKYPFI-SAESWGTQTIEPRAQVIIRP--NESNIGKFPNEDAQSLVFDDTN 621

Query: 537 LFRDRSYSGLDRIASANQVSTGITSRVYDAA--AVERFNISVGQIYYFTEARTGDDNINW 594
           LF    YSG DR+   ++++ G+T   Y AA      F   VGQ Y          N+  
Sbjct: 622 LFEINKYSGYDRVEGGSRLNLGVT---YTAAINGAGLFTAVVGQSY----------NLFG 668

Query: 595 ENNDTRGSLVWAGDTYWRITDDWGLRGGIQYDTRLDNVATGSGTVEY-------RRDENR 647
           +N+   G +            + GL  G++          G    +Y       R DE  
Sbjct: 669 KNSYAYGDMA-----------NTGLESGLETSASDYIAKFGYSPTKYLEFVTRFRFDEQN 717

Query: 648 L----VQLNYRYASPEY-IQATLPSYSTAK--QYKDGISQVGMTASWPIVDRWAVVGAYY 700
                 +L  R     + I  T   Y       Y D    +   AS+ + D WAV GA  
Sbjct: 718 FSMQRFELQARAEIDRFNIAVTYGRYEAQPLLGYYDPREGIYTNASYKLNDNWAVRGAIR 777

Query: 701 YDTNTRKSANQMLGVQYSSCCYAIRVGY 728
           YD    +    ++G+ Y   C+ + + Y
Sbjct: 778 YDFAAGEVDYTLVGLSYIDDCFTLALNY 805