Pairwise Alignments

Query, 780 a.a., LPS assembly protein LptD from Klebsiella michiganensis M5al

Subject, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

 Score =  316 bits (809), Expect = 4e-90
 Identities = 230/809 (28%), Positives = 368/809 (45%), Gaps = 90/809 (11%)

Query: 40  RPLVEGKPN--DLPVTIDADHAKGNYPDN-AVFTGNVDINQGNSRLQADEVQLHQQQADG 96
           RP +  K N  D P  I A  ++       A   G+V + QG+ +L+++E  L+Q +  G
Sbjct: 140 RPGMNDKTNKSDAPTFIGAKASRYEQEQQVATLAGDVVMRQGSMQLESEEASLYQAENRG 199

Query: 97  QPQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQ 156
           +          G V   DN  ++ G  A   L+T    +   +Y +   + RG A L  +
Sbjct: 200 ELN--------GKVRLRDNGALIVGDHAEVQLDTGAAQIDNAEYVLHKSRIRGNA-LYAK 250

Query: 157 RGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYL 216
           R EN    L++G++T+C P S+ W + G+ +  +         NA  ++ ++PI Y+PY+
Sbjct: 251 RAENAIIRLKDGTYTTCEPDSNAWQLRGNNITLNPATGFGTATNATLRIKNIPILYTPYI 310

Query: 217 QLPVGDKRRSGFLIPNAKYSTKNGAEFYLPYYWNIAPNFDATLTPHYMSKRGGVMWENEF 276
             P+ D+R+SGFL P+    ++ G     PYY+N+APN+DATL P YM+KR G++ E EF
Sbjct: 311 YFPIDDRRQSGFLPPSFSTGSETGFTLVTPYYFNLAPNYDATLYPQYMTKR-GLLMEGEF 369

Query: 277 RYLTKAGTGLIEFDYLPSDKIYQDDHSGDSNSRRWLFYWNHSGVVDQVWRFNADYTKVSD 336
           RYLTK+  G     YL  D   +   + D    R++  W H G +D       DYT++SD
Sbjct: 370 RYLTKSSEGQFGGAYLNDDNDERSKQT-DYEKTRYMLNWQHRGGLDSRLATQVDYTRISD 428

Query: 337 PDYFNDFSS-KYGSSTDGYATQKLSAGYANQNFDATVSTKQFQVFNRDSSNAYSAEPQLD 395
           P YF D  S + G  +     Q+ S  Y   ++ A ++ + +Q+        Y   PQ+ 
Sbjct: 429 PYYFQDLKSFQEGVESRDALNQQGSVTYRGDSYQARLNVQAYQLATISQITPYDRLPQIT 488

Query: 396 VN-YYQNDVGPFDTHLYGQAVHFVNSNSR----------------------MPEATRVHF 432
            N       G  +     +AV F  S  +                          TR++ 
Sbjct: 489 FNGALPYHPGGLNFTYETEAVRFERSLEKGTFTDQDGLVSPRLDTYVTGLTRANGTRLNV 548

Query: 433 EPTINLPLSNGWGSINTEAKLLATHY--------------QQSNLDDYNAANGTDYKDSV 478
            P ++ P++  +G I  + K + T Y              QQ+     N   G D+K S 
Sbjct: 549 APAVDYPMNWTYGFITPKLKYVYTKYDLDLDSIGKNQIIAQQAAATAANPYAGGDFKSSQ 608

Query: 479 NRVMPQFKVDGKMVFERDMQ---ENYTQTLEPRMQYLYIPYRDQSKIGTYDSTLLQSDYS 535
           +R +P   VD  + F+R+     ++Y QTLEPR  YLY+P +DQS I  +D++     Y+
Sbjct: 609 DRAVPVASVDSGLYFDRNTNWFGKDYRQTLEPRAFYLYVPNKDQSDIPVFDTSEYSFSYA 668

Query: 536 GLFRDRSYSGLDRIASANQVSTGITSRVYDAAAVERFNISVGQIYYFTEARTGDDNINWE 595
            LFRD  +SG DRI   N++S G+TSR  +    ER  +SVGQ  YF +       I   
Sbjct: 669 SLFRDNRFSGSDRIGDENKLSLGLTSRWIEENGFERQRVSVGQAVYFKDREVQLPGILAA 728

Query: 596 NNDTRGSLV--WAGDTYWRITDDWGLRGGIQYDTRLDNVATGSGTVEYRRDE--NRLVQL 651
           +     S V   A D  +R   DW       +DT   +  +GS  + Y+ ++  N+++ +
Sbjct: 729 DRADAQSDVSPVALDYEFRFNRDWRATADYNWDTEEHSPRSGSAMLHYQPEDNPNKIINV 788

Query: 652 NYRYASPEYIQATL---------------PSYSTAKQYKDGISQVGMTASWPIVDRWAVV 696
            YRY + + +   L               P++     YK  I Q   +  WPI+ +W ++
Sbjct: 789 GYRYRNDQVVYNQLTGKWQFGGDYGQPGDPNF-VKDYYK--IQQHDFSMMWPIIPQWNLI 845

Query: 697 GAYYYDTNTRKSANQMLGVQYSSCCYAIRVGYERKINGWDNSSSE--------SKYDNTF 748
             + YD    ++     G +Y +CC+ +RV     IN +  S+ E         K D+  
Sbjct: 846 TRWQYDYARNRTLEAFGGFEYDNCCWKLRV-----INRYWVSNDEYSQIAPLNEKGDHGL 900

Query: 749 GFNIELRGLSSNYGLGTQQMLRSNILPYQ 777
            F I L+GL    G   +  L   I  Y+
Sbjct: 901 FFQIVLKGLGGLTGAKVESFLDKGIEGYR 929