Pairwise Alignments

Query, 780 a.a., LPS assembly protein LptD from Klebsiella michiganensis M5al

Subject, 784 a.a., LPS assembly OM complex LptDE, beta-barrel component from Escherichia coli BL21

 Score = 1370 bits (3547), Expect = 0.0
 Identities = 647/784 (82%), Positives = 713/784 (90%), Gaps = 4/784 (0%)

Query: 1   MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYNRPLVEGKPNDLPVTIDADHAK 60
           MKKRIP+LLATMIA+ALYSQQGLAADLA+QCMLGVPSY+RPLV+G  NDLPVTI+ADHAK
Sbjct: 1   MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAK 60

Query: 61  GNYPDNAVFTGNVDINQGNSRLQADEVQLHQQQADGQPQPVRTVDALGNVHYDDNQVILK 120
           G+YPD+AVFTG+VDI QGNSRLQADEVQLHQ++A GQP+PVRTVDALGNVHYDDNQVILK
Sbjct: 61  GDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILK 120

Query: 121 GPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTW 180
           GPK W+NLNTKDTNVW+GDYQMVGRQGRG ADLMKQRGENRYTIL+NGSFTSCLPGSDTW
Sbjct: 121 GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTW 180

Query: 181 SVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNG 240
           SVVGSE+IHDREEQVAEIWNARFK+G VPIFYSPYLQLPVGDKRRSGFLIPNAKY+T N 
Sbjct: 181 SVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNY 240

Query: 241 AEFYLPYYWNIAPNFDATLTPHYMSKRGGVMWENEFRYLTKAGTGLIEFDYLPSDKIYQD 300
            EFYLPYYWNIAPN DAT+TPHYM +RG +MWENEFRYL++AG GL+E DYLPSDK+Y+D
Sbjct: 241 FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYED 300

Query: 301 DHSGDSNSRRWLFYWNHSGVVDQVWRFNADYTKVSDPDYFNDFSSKYGSSTDGYATQKLS 360
           +H  D +SRRWLFYWNHSGV+DQVWRFN DYTKVSDP YFNDF +KYGSSTDGYATQK S
Sbjct: 301 EHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFS 360

Query: 361 AGYANQNFDATVSTKQFQVFNRDSSNAYSAEPQLDVNYYQNDVGPFDTHLYGQAVHFVNS 420
            GYA QNF+ATVSTKQFQVF+  ++++YSAEPQLDVNYYQNDVGPFDT +YGQAVHFVN+
Sbjct: 361 VGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNT 420

Query: 421 NSRMPEATRVHFEPTINLPLSNGWGSINTEAKLLATHYQQSNLDDYNAANGTDYKDSVNR 480
              MPEATRVH EPTINLPLSN WGSINTEAKLLATHYQQ+NLD YN+ N T   +SVNR
Sbjct: 421 RDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNR 480

Query: 481 VMPQFKVDGKMVFERDMQ---ENYTQTLEPRMQYLYIPYRDQSKIGTYDSTLLQSDYSGL 537
           VMPQFKVDGKMVFERDM+     YTQTLEPR QYLY+PYRDQS I  YDS+LLQSDYSGL
Sbjct: 481 VMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGL 540

Query: 538 FRDRSYSGLDRIASANQVSTGITSRVYDAAAVERFNISVGQIYYFTEARTGDDNINWENN 597
           FRDR+Y GLDRIASANQV+TG+TSR+YD AAVERFNISVGQIYYFTE+RTGDDNI WEN+
Sbjct: 541 FRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWEND 600

Query: 598 DTRGSLVWAGDTYWRITDDWGLRGGIQYDTRLDNVATGSGTVEYRRDENRLVQLNYRYAS 657
           D  GSLVWAGDTYWRI++ WGLRGGIQYDTRLDNVAT + ++EYRRDE+RLVQLNYRYAS
Sbjct: 601 DKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYAS 660

Query: 658 PEYIQATLPS-YSTAKQYKDGISQVGMTASWPIVDRWAVVGAYYYDTNTRKSANQMLGVQ 716
           PEYIQATLP  YSTA+QYK+GISQVG  ASWPI DRW++VGAYYYDTN  K A+ MLGVQ
Sbjct: 661 PEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQ 720

Query: 717 YSSCCYAIRVGYERKINGWDNSSSESKYDNTFGFNIELRGLSSNYGLGTQQMLRSNILPY 776
           YSSCCYAIRVGYERK+NGWDN    + YDN  GFNIELRGLSSNYGLGTQ+MLRSNILPY
Sbjct: 721 YSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY 780

Query: 777 QSSL 780
           Q++L
Sbjct: 781 QNTL 784