Pairwise Alignments

Query, 909 a.a., multidrug ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

Subject, 578 a.a., ABC transporter multidrug efflux pump, fused ATP-binding domains from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  214 bits (545), Expect = 1e-59
 Identities = 123/299 (41%), Positives = 177/299 (59%), Gaps = 11/299 (3%)

Query: 215 AGEVLATGSADELKAHTASQTLEQAFIALLPDAQRLAHKEVIIPPRHTDED---EIAIEA 271
           A ++       E+  +  +   E AFI LL  A     +  +    HT E    E  IEA
Sbjct: 275 AADIRQAEGMPEITLNETAPRFEDAFIDLLGGAG--TSESPLGSILHTVEGTAGETVIEA 332

Query: 272 RGLTMRFGNFVAVDHVNFRIARGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQP 331
           + LT +FG+F A DHVNF + RGEIFG LG NG GKSTT KM+ GLL  + G+A +    
Sbjct: 333 QELTKKFGDFAATDHVNFVVQRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGKALVLDMD 392

Query: 332 VDPRDIETRRRVGYMSQAFSLYSELTVRQNLELHARLFHIPKAEIPGRIAEMSQRFMLEE 391
           +     + R+ +GYM+Q FSLY  LTV QNL   + ++ +       +I  MS+ F L+ 
Sbjct: 393 LKVSSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKIQRMSEAFGLKS 452

Query: 392 VEDTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLARQDRV 451
           +      +LPLG +QRL+LA +++H P++L LDEPTSGVDP+ R  FW L ++   +  V
Sbjct: 453 IASHPTDALPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFW-LHINSMVEKGV 511

Query: 452 TIFISTHFMNEAERCDRISLMHAGKVLASDTP-----QALVEQRGSASLEEAFIAWLQE 505
           T+ ++THFM+EAE CDRI L++ GK++AS TP     QA  EQ+   ++E+AFI  + +
Sbjct: 512 TVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQAADEQQADPTMEQAFITLIND 570



 Score =  145 bits (366), Expect = 7e-39
 Identities = 85/236 (36%), Positives = 137/236 (58%), Gaps = 8/236 (3%)

Query: 2   KTVARLENVSQRFGAT--VALKDITLSIPARCMVGLIGPDGVGKSSLLSLISGARVIERG 59
           + V  L  +++RF      A+  +  +I +  + GL+GPDG GK++L+ +++G    + G
Sbjct: 3   EAVITLHGLTKRFAGMDKPAVAPLDCTIHSGYVTGLVGPDGAGKTTLMRMLAGLLKADGG 62

Query: 60  NVMVLGGDMRDVRHRQDVCPKIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAERDIR 119
           +  VLG D   +++  ++   + +MPQ  G  LY  L+V EN++ +A L       R+  
Sbjct: 63  SASVLGFD--PIQNDSELHAVLGYMPQKFG--LYEDLTVMENLNLYADLRSVTGEIREKT 118

Query: 120 INELLQSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPQLLILDEPTTGVDPLSRAQFW 179
              LL+ T L PF  R AGKLSGGMKQKLGL C L+ +P++L+LDEP  GVDP+SR + W
Sbjct: 119 FARLLEFTALGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELW 178

Query: 180 DLIDNIRQRQPEMSVLVATAYMEEAERFDWLVAMNAGEVLATGSADELKAHTASQT 235
            ++  +      M +L +T+Y++EAE+   ++ MN GE+L  G    L    A ++
Sbjct: 179 QMVHEL--AGDGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRS 232



 Score =  142 bits (358), Expect = 6e-38
 Identities = 84/252 (33%), Positives = 146/252 (57%), Gaps = 15/252 (5%)

Query: 2   KTVARLENVSQRFGATVALKDITLSIPARCMVGLIGPDGVGKSSLLSLISGARVIERGNV 61
           +TV   + ++++FG   A   +   +    + GL+GP+G GKS+   ++ G  V   G  
Sbjct: 327 ETVIEAQELTKKFGDFAATDHVNFVVQRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGKA 386

Query: 62  MVLGGDMR--DVRHRQDVCPKIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAERDIR 119
           +VL  D++    + RQ     + +M Q    +LY  L+V +N+ FF+ ++G     ++ +
Sbjct: 387 LVLDMDLKVSSGKARQH----LGYMAQKF--SLYGNLTVEQNLRFFSGVYGLRGRAQNEK 440

Query: 120 INELLQSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPQLLILDEPTTGVDPLSRAQFW 179
           I  + ++ GL      P   L  G KQ+L L C+L+H+P +L LDEPT+GVDPL+R +FW
Sbjct: 441 IQRMSEAFGLKSIASHPTDALPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFW 500

Query: 180 DLIDNIRQRQPEMSVLVATAYMEEAERFDWLVAMNAGEVLATGSADELKAHTASQ----- 234
             I+++ ++   ++V+V T +M+EAE  D +  +  G+++A+G+ D+LKA  A +     
Sbjct: 501 LHINSMVEK--GVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQAADEQQADP 558

Query: 235 TLEQAFIALLPD 246
           T+EQAFI L+ D
Sbjct: 559 TMEQAFITLIND 570



 Score =  134 bits (338), Expect = 1e-35
 Identities = 84/231 (36%), Positives = 123/231 (53%), Gaps = 3/231 (1%)

Query: 266 EIAIEARGLTMRFGNF--VAVDHVNFRIARGEIFGFLGSNGCGKSTTMKMLTGLLPASEG 323
           E  I   GLT RF      AV  ++  I  G + G +G +G GK+T M+ML GLL A  G
Sbjct: 3   EAVITLHGLTKRFAGMDKPAVAPLDCTIHSGYVTGLVGPDGAGKTTLMRMLAGLLKADGG 62

Query: 324 EAWLFGQPVDPRDIETRRRVGYMSQAFSLYSELTVRQNLELHARLFHIPKAEIPGRIAEM 383
            A + G      D E    +GYM Q F LY +LTV +NL L+A L  +         A +
Sbjct: 63  SASVLGFDPIQNDSELHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEIREKTFARL 122

Query: 384 SQRFMLEEVEDTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMV 443
            +   L      L   L  G++Q+L LA  ++  P++L+LDEP  GVDP++R   WQ++ 
Sbjct: 123 LEFTALGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVH 182

Query: 444 DLARQDRVTIFISTHFMNEAERCDRISLMHAGKVLASDTPQALVEQRGSAS 494
           +LA  D + I  ST +++EAE+C  + LM+ G++L    P+AL +     S
Sbjct: 183 ELA-GDGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRS 232