Pairwise Alignments

Query, 909 a.a., multidrug ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

Subject, 578 a.a., putative ABC transporter ATPase from Escherichia coli BL21

 Score =  215 bits (547), Expect = 7e-60
 Identities = 120/288 (41%), Positives = 175/288 (60%), Gaps = 11/288 (3%)

Query: 226 ELKAHTASQTLEQAFIALLPDAQRLAHKEVIIPPRHTDED---EIAIEARGLTMRFGNFV 282
           E+  +  +   E AFI LL  A     +  +    HT E    E  IEA+ LT +FG+F 
Sbjct: 286 EININETTPRFEDAFIDLLGGAG--TSESPLGAILHTVEGTPGETVIEAKELTKKFGDFA 343

Query: 283 AVDHVNFRIARGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPRDIETRRR 342
           A DHVNF + RGEIFG LG NG GKSTT KM+ GLL  + G+A + G  +     + R+ 
Sbjct: 344 ATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQH 403

Query: 343 VGYMSQAFSLYSELTVRQNLELHARLFHIPKAEIPGRIAEMSQRFMLEEVEDTLPASLPL 402
           +GYM+Q FSLY  LTV QNL   + ++ +       +I+ MS+ F L+ +       LPL
Sbjct: 404 LGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPL 463

Query: 403 GIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLARQDRVTIFISTHFMNE 462
           G +QRL+LA +++H P++L LDEPTSGVDP+ R  FW L ++   +  VT+ ++THFM+E
Sbjct: 464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFW-LHINSMVEKGVTVMVTTHFMDE 522

Query: 463 AERCDRISLMHAGKVLASDTP-----QALVEQRGSASLEEAFIAWLQE 505
           AE CDRI L++ GK++AS TP     Q+  +++   ++E+AFI  + +
Sbjct: 523 AEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQLIHD 570



 Score =  144 bits (364), Expect = 1e-38
 Identities = 82/250 (32%), Positives = 149/250 (59%), Gaps = 11/250 (4%)

Query: 2   KTVARLENVSQRFGATVALKDITLSIPARCMVGLIGPDGVGKSSLLSLISGARVIERGNV 61
           +TV   + ++++FG   A   +  ++    + GL+GP+G GKS+   ++ G  V   G  
Sbjct: 327 ETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQA 386

Query: 62  MVLGGDMRDVRHRQDVCPKIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAERDIRIN 121
           +VLG D+++   +      + +M Q    +LY  L+V +N+ FF+ ++G     ++ +I+
Sbjct: 387 LVLGMDLKESSGKAR--QHLGYMAQKF--SLYGNLTVEQNLRFFSGVYGLRGRAQNEKIS 442

Query: 122 ELLQSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPQLLILDEPTTGVDPLSRAQFWDL 181
            + ++ GL         +L  G KQ+L L C+L+H+P +L LDEPT+GVDPL+R +FW  
Sbjct: 443 RMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLH 502

Query: 182 IDNIRQRQPEMSVLVATAYMEEAERFDWLVAMNAGEVLATGSADELKAHTASQ-----TL 236
           I+++ ++   ++V+V T +M+EAE  D +  +  G+++A+G+ D+LKA +A+      T+
Sbjct: 503 INSMVEK--GVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTM 560

Query: 237 EQAFIALLPD 246
           EQAFI L+ D
Sbjct: 561 EQAFIQLIHD 570



 Score =  141 bits (356), Expect = 1e-37
 Identities = 85/234 (36%), Positives = 133/234 (56%), Gaps = 8/234 (3%)

Query: 4   VARLENVSQRFGAT--VALKDITLSIPARCMVGLIGPDGVGKSSLLSLISGARVIERGNV 61
           V  L  + +RF      A+  +  +I A  + GL+GPDG GK++L+ +++G    + G+ 
Sbjct: 5   VITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSA 64

Query: 62  MVLGGDMRDVRHRQDVCPKIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAERDIRIN 121
            V+G D   +++   +   + +MPQ  G  LY  L+V EN++ +A L       R     
Sbjct: 65  TVIGFD--PIKNDGALHAVLGYMPQKFG--LYEDLTVMENLNLYADLRSVTGEARKQTFA 120

Query: 122 ELLQSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPQLLILDEPTTGVDPLSRAQFWDL 181
            LL+ T L PF  R AGKLSGGMKQKLGL C L+ +P++L+LDEP  GVDP+SR + W +
Sbjct: 121 RLLEFTSLGPFTRRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQM 180

Query: 182 IDNIRQRQPEMSVLVATAYMEEAERFDWLVAMNAGEVLATGSADELKAHTASQT 235
           +  +      M +L +T+Y++EAE+   ++ MN GE+L  G    L    A ++
Sbjct: 181 VHELAGE--GMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRS 232



 Score =  126 bits (317), Expect = 3e-33
 Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 3/232 (1%)

Query: 265 DEIAIEARGLTMRFGNF--VAVDHVNFRIARGEIFGFLGSNGCGKSTTMKMLTGLLPASE 322
           ++  I   GL  RF      AV  ++  I  G + G +G +G GK+T M+ML GLL    
Sbjct: 2   NDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDS 61

Query: 323 GEAWLFGQPVDPRDIETRRRVGYMSQAFSLYSELTVRQNLELHARLFHIPKAEIPGRIAE 382
           G A + G      D      +GYM Q F LY +LTV +NL L+A L  +         A 
Sbjct: 62  GSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFAR 121

Query: 383 MSQRFMLEEVEDTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM 442
           + +   L      L   L  G++Q+L LA  ++  P++L+LDEP  GVDP++R   WQ++
Sbjct: 122 LLEFTSLGPFTRRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMV 181

Query: 443 VDLARQDRVTIFISTHFMNEAERCDRISLMHAGKVLASDTPQALVEQRGSAS 494
            +LA +  + ++ ST +++EAE+C  + LM+ G++L    P+AL +     S
Sbjct: 182 HELAGEGMLILW-STSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRS 232