Pairwise Alignments

Query, 420 a.a., site-specific recombinase, phage integrase family protein from Klebsiella michiganensis M5al

Subject, 420 a.a., integrase arm-type DNA-binding domain-containing protein from Serratia liquefaciens MT49

 Score =  490 bits (1261), Expect = e-143
 Identities = 243/419 (57%), Positives = 308/419 (73%), Gaps = 3/419 (0%)

Query: 1   MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT 60
           M L+  +V TAKP+ K YK+ DG G+ L V   GSKYWR++YR     KE  LA G +P 
Sbjct: 1   MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGG--KEKMLALGKYPE 58

Query: 61  VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSG-AYTFETIAREWHASNKRWSEDHR 119
           V+LA AR +RDEA+K L  GIDP   +K  + E    A TFE +AR+WHASN++WSE H 
Sbjct: 59  VSLADARTRRDEARKHLSNGIDPSENKKAVKVEQEQEAITFEVVARDWHASNQKWSESHS 118

Query: 120 SRVLRYLELYIFPYIGTSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQ 179
            RVL+ LE  +F  IG  +I +LKT  LL PIK V+ SG+ +VA RLQQR TAIMR+AVQ
Sbjct: 119 DRVLKSLEDNLFDAIGKRNIAELKTRDLLTPIKAVEMSGRLEVAARLQQRTTAIMRFAVQ 178

Query: 180 NDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFV 239
           +  ID NPA ++ GA++T K +H  AL  +R PE L R+  Y GR +TR+AVEL+LL F+
Sbjct: 179 SGLIDYNPAQEITGAVATAKRQHRAALELNRIPELLHRIDTYTGRPLTRLAVELTLLVFI 238

Query: 240 RSSELRFARWEEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLAQL 299
           RSSELRFARW E DF+ ++W +P +RE ++GV++S+RG KM+  H+VPLSRQA+ +L Q+
Sbjct: 239 RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLVPLSRQALTILEQI 298

Query: 300 KQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLW 359
           K +SG++EL+F GDHD  K MSENTVN ALR MGYDTK EVCGHGFRTMA  +L ESGLW
Sbjct: 299 KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGLW 358

Query: 360 SDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDMNKSTYITSFDFARLK 418
           S DA+ERQ+SH ERN+VRAAYIH +EHL ERRLMVQWWADYLD N+    + FDF R++
Sbjct: 359 SKDAVERQMSHQERNSVRAAYIHKAEHLGERRLMVQWWADYLDANREKGASPFDFGRVR 417