Pairwise Alignments

Query, 1108 a.a., miniconductance mechanosensitive channel MscM from Klebsiella michiganensis M5al

Subject, 1102 a.a., mechanosensitive channel protein, intermediate (smaller, MscS-like) conductance, K+ efflux from Pseudomonas putida KT2440

 Score =  389 bits (1000), Expect = e-112
 Identities = 318/1122 (28%), Positives = 527/1122 (46%), Gaps = 82/1122 (7%)

Query: 6    TFLLAWCLS--FGAYAATAPDAKQIAQELE---QAKAAKPAQPETVEVLQSALNALEERN 60
            T LL  CLS  F A AA AP    I   L+   + K  +  Q    +VL+  L+ L  + 
Sbjct: 9    TALLGLCLSLSFAAGAAEAPTTASIQNSLDKIAERKLPEADQKALQQVLEQTLSLLAAKE 68

Query: 61   ASLERVRQYQDVIDNFPKLSQTLRAQLNNLSDEPRQVSTTLSSDALNQEILQVSSQLLEA 120
             + +++   +  + + PK +   + +L  L +   Q      +     ++     Q+L  
Sbjct: 69   DNEKKLAALKQQLSSAPKETSDSQKELAKLKETKAQPVAQRYATLTVPQL----EQMLSE 124

Query: 121  SRKAQQEQDRARDIADSLNQLPQQQSDARRQLNEVERRVGAQNSNTPLAQAQNLG----- 175
                Q E  +A   A+SL  +  Q    R Q      +   Q  N  L   ++ G     
Sbjct: 125  RNTQQGELQKALSEANSLI-INSQTRPERAQAEISSSQTRTQQINNILKTGKDGGKAINA 183

Query: 176  -----LQAESARLKALVDELDLAQLSANNR-QELSRLRSELAQKESEQLDAWLQALRNQL 229
                 L AE A L AL   L   +L+ N+  Q+L   R +L  + + +L+  +Q L+  +
Sbjct: 184  DQRNQLNAELASLNALT-LLRRQELAGNSLLQDLGNARHDLMVERAARLEQEIQDLQTLI 242

Query: 230  NNQRQREAEKALESTELLAENSENLPPDIVAQFKVNRELSQALNQQAQRMDLIASQQRQA 289
            N +R  ++++A+    + A+ +      +  +  +N +LS  L +   R++ +  Q  + 
Sbjct: 243  NAKRLAQSQEAVTQQSIEAQKAGGSSL-LATESAINLKLSDYLLKSTDRLNELTQQNLRT 301

Query: 290  TNQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEIPRPQQL-----DTEMAQLR 344
              Q   + QA   L EQ   L  S LL + L  Q   LP +   + L     DT + Q  
Sbjct: 302  KQQLDSLTQADQALDEQINVLKGSLLLSKILYKQKQTLPHLKVDRDLADQIADTRLYQFE 361

Query: 345  VQRLR--------YEDQL-GKQPQLRQIRQADGEPLTSEQNRILQAQMRTQTELLNSLLR 395
            V + R        Y D+L   QPQ         E +T +  + L     T+++LL  L R
Sbjct: 362  VNQQREQMSSPVTYVDKLLAAQPQ---------EDVTPQLRKALLEVAITRSDLLERLNR 412

Query: 396  GGDTLMLELTKLKVANGQLEDALKEINEATHRYLFWTSDVSPIGFSWPLEIVQDLR-RLI 454
                L+ E   L++   QL    + +       +FW     P+ + W   + + L  ++ 
Sbjct: 413  ELSALLNESITLQLNQKQLLGTAQSLRTTLDEQMFWIPSNKPLDWDWLQYVPKRLADQVA 472

Query: 455  SLDTMSQLGKASMMMLTSKETLLPLFVALILVGFSISSRRHFTSFLERSSARVGKVTQDH 514
            +L   S L + +  +       LPL   L+++G  +  R++    L +    +G   +D 
Sbjct: 473  NLPWGSSLKELADGLSQRPLLFLPL---LLVIGALLWRRKYLYQRLGKVHQDIGHFRRDS 529

Query: 515  FWLTLRTVFWSILVASPLPVLWMTLGYGLQAAWPFPLAVAIGDSVTATVPL-----LWVV 569
             W T + +  +IL+A P+ +      Y LQ         A G +      L      W+V
Sbjct: 530  QWHTPQAILINILLAMPVSLGLALCSYALQID-------ARGQNANLGAALWQLAQAWLV 582

Query: 570  MICA-TFARPNGLFVAHFGWPRSRVSKAMRYYLMSIGLIVPLIMALITFDNLNDREFSAS 628
               A     P G+   HF W + +V + +R ++  +G +V  ++ ++          +  
Sbjct: 583  FYTAYRILAPGGVAEVHFRWHKPQV-EFLRGWVRRLGTVVLALVGVVAVAEHQPSALADD 641

Query: 629  LGRLCFMLICGALAMVTLSLKRAGIPLYLDKEGSGDNMLNRLLWNMLLGAPLVAMLAAAI 688
            +  +  +L C AL    LS      P + D      ++  R +       P+   +A   
Sbjct: 642  VLGIGVVLTCYALMAWLLSRLLLSSPAHRDT-----SLFRRAVGVAFTALPIALFVAVCF 696

Query: 689  GYLATAQALLARLETSVAIWFLLLVVYHIIRRWMLIQRRRLAFDRAKHRRAEILAQRARG 748
            GY  TA  L  RL  ++ +    LV+     R + +  RRLA+ RA       L +RA  
Sbjct: 697  GYYYTALKLTDRLIYTLYLLLFWLVIEAAFVRGLSVAARRLAYQRA-------LTKRAAA 749

Query: 749  EEEAQHTSSPEGSMEAEVSEVDLDAISTQSLRLVRSLLMLIALVSVIVLWSEIHSAFSFL 808
            +E        +G +  E   +D++ ++ QSLRL+R  L+   +  +  +W+++ S F++L
Sbjct: 750  KEGL------DGEVITEEPTLDIEQVNQQSLRLIRLALLGGFIAGLYWVWADLISVFAYL 803

Query: 809  ENISLWDVTSTVQGVESLEPITLGAVLIAILVLIITTQLVRNLPALLELAILQHLELTPG 868
             N  L++ TS      S+ PI+LG +L A++++ IT  L  NLP LLE+ +L  L L  G
Sbjct: 804  NNFVLYEYTSGTGAAASMVPISLGDLLGALVIVGITFALAGNLPGLLEVLVLSRLNLAQG 863

Query: 869  TGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLIAALGVGLGFGLQEIFANFISGLII 928
            + YA TT+  Y ++ IG +   S +G+ W KLQWL+AAL VGLGFG+QEIFANFISG++I
Sbjct: 864  SAYATTTLLSYTIVGIGIVSTLSTLGVSWDKLQWLVAALSVGLGFGMQEIFANFISGIMI 923

Query: 929  LFEKPIRIGDTVTIRDLTGSVTRINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSV 988
            LFE+P+RIGDT+TI +L+G+V++I  RATTI+D+DRK+IIVPNK FIT Q INWSL+D+V
Sbjct: 924  LFERPVRIGDTITIGNLSGTVSKIRIRATTITDFDRKDIIVPNKTFITGQLINWSLTDTV 983

Query: 989  TRVVLTVPAPVDANTEEVAQILLNAAHRCSLVIDTPAPEAFLVDLQQGIQIFELRIYAAE 1048
            TRV L +     ++ + V  +LL  AH    V+  P P  + ++  +     ELR++  +
Sbjct: 984  TRVTLKLGIDYGSDLDLVRDLLLKGAHENPRVLKDPEPIVYFLNFGESSLDHELRMHVRD 1043

Query: 1049 MGHRMPLRHEMHQLILAGFREHGIDMPFPPFQMRLESIDGRK 1090
            +G R P   E+++ I   F+ H I +     ++ L    G K
Sbjct: 1044 LGDRNPTLDEINRYINREFKAHNIKISVRQVEVFLMDAKGSK 1085