Pairwise Alignments

Query, 1108 a.a., miniconductance mechanosensitive channel MscM from Klebsiella michiganensis M5al

Subject, 803 a.a., putative membrane protein from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 2e-38
 Identities = 199/832 (23%), Positives = 351/832 (42%), Gaps = 121/832 (14%)

Query: 271  ALNQQAQRMDLIASQQRQATNQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPE- 329
            +L Q + R+DLI        N  +  +  L  ++ Q Q    ++ L     A V +L + 
Sbjct: 51   SLEQLSDRLDLIRQGVTSEANDDVLSQLRLGAMQVQRQ----ADALSALRTADVGKLDDQ 106

Query: 330  --IPRPQQLDTEMAQLRVQRLRYEDQ----LGKQPQLRQIRQADGEPLTSEQNRILQAQM 383
              +  P Q D E A L  QR   E +    + +Q Q  ++ Q+    L+++   + ++Q 
Sbjct: 107  LKVIGPAQPD-EAATLTQQRKALEAEKKALVAQQDQATKLTQS-ARDLSTQIVNLRRSQF 164

Query: 384  RTQTE----------LLNSLLRGGDTLMLELTKLKVANGQLEDALKEINEATHRYLFWTS 433
             +Q               S++R       ++ +L+   G+  DA+     A +R+LF  S
Sbjct: 165  NSQITSRAASPLSPAFWQSIIRPTQD---DVARLRDLRGEAADAISSAFSAENRWLFVAS 221

Query: 434  DVSPIGFSWPLEIVQDLRRLISLDTMSQLGKASMMMLTSKETLLPLFVALILVGFSISSR 493
             V+ I   W L + + L RL++   +  L +  +     + + L L V+L  +G    S 
Sbjct: 222  LVAAI-LVWTL-VRRVLERLLASAMIRWLPEGRL-----RRSALALGVSLATLGTIAGSV 274

Query: 494  RHFTSFLERSSARVGK--VTQDHFWLTLRTVFWSILVASPLPVLWMTLGYGLQAAWPFPL 551
                  LE S+AR+G    +  +  LTL  VF + +      +L +      + +W  P 
Sbjct: 275  SLLRWGLE-SNARLGSDITSLTNHILTL-VVFSAFITGLGRAMLMLQ-----RPSWRLP- 326

Query: 552  AVAIGDSVTATVP-----LLWVVMICATFARPNGLFVAHFGWPRSRVSKAMRYYLMSIGL 606
              AI D V + +      L   +M+  T  R N +  A                 +++  
Sbjct: 327  --AIHDEVASALGWFPKVLALALMVMMTMERMNSVIGASLA------------LTVAVNG 372

Query: 607  IVPLIMALITFDNLNDREFSASLGRLCFMLICGALAMVTLSLKRAGIPLYLDKEGSGDNM 666
            +  L++AL TF                     GAL     +L++  +       G    +
Sbjct: 373  LTALVVAL-TF--------------------AGALLCYRRTLRKHDLERPTGLAGLIPFV 411

Query: 667  LNRLLWNMLLGAPLVAMLAAAIGYLATAQALLARLETSVAIWFLLLVVYHIIRRWMLIQR 726
            +  ++W  L+      +LA   GYL  A  L A+L     +W  L++    +        
Sbjct: 412  M--VIWLTLI------LLALLTGYLTLAYFLTAKL-----LWVSLVITCAYLLTTFFGDL 458

Query: 727  RRLAFDRAKHRRAEILAQRARGEEEAQHTSSPEGSMEAEVSEVDLDAISTQSLRLVRSLL 786
                          +L+ R  G      T       +A+ S + L  I        R+++
Sbjct: 459  CET-----------LLSPRQPGGLALASTLGLAPRHQAQASTI-LAGIG-------RTVV 499

Query: 787  MLIALVSVIVLWSEIHSAFSFLENISLWDVTS-TVQGVESLEPITLGAVLIAILVLIITT 845
            + +AL+  +VL     S    L ++  WD T   V G  ++ P     +L+A+ + +   
Sbjct: 500  LFLALL--LVLMPSGTSPSELLLSLGDWDGTGGKVLGNLNIVPQD---ILLALAIFLGGL 554

Query: 846  QLVRNLPALLELAILQHLELTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLIA 905
              +R +   L   +L   E+  G   ++ T+  YL  L   ++  S + I  + L W+++
Sbjct: 555  FAIRVVKRWLSDRLLPETEMDAGMRASLVTLVGYLGFLFLAMLVMSTLRINLTSLTWVVS 614

Query: 906  ALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTRINTRATTISDWDRK 965
            AL VG+GFGLQ+I  NFISGLI+L E+P+++GD V++  + G + RIN RAT I   DR 
Sbjct: 615  ALSVGIGFGLQQIVQNFISGLILLTERPVKVGDWVSLAGVEGDIRRINVRATEIQMSDRS 674

Query: 966  EIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPVDANTEEVAQILLNAAHRCSLVIDTPA 1025
             +IVPN  FI++   N ++ +++  V +T+  P++ +   V ++LL A H    ++D PA
Sbjct: 675  TVIVPNSQFISQNVRNVTMGNALGVVSITLTLPLETDANRVRELLLAAYHEHEAILDAPA 734

Query: 1026 PEAFLVDLQQGIQIFELRIYAAEMGHRMPLRHEMHQLILAGFREHGIDMPFP 1077
                  DL     +  +  Y A        R ++   IL   R+ GI +  P
Sbjct: 735  ASVSFKDLTASGMVIGVSGYVAGPRQVSGARSDLLFTILGRLRDEGIPLSSP 786