Pairwise Alignments

Query, 228 a.a., fimbrial assembly chaperone SthB from Klebsiella michiganensis M5al

Subject, 249 a.a., pilus assembly protein from Pseudomonas simiae WCS417

 Score =  105 bits (262), Expect = 8e-28
 Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 12/227 (5%)

Query: 8   VLFFFCISVSQASVVVGGTRVIFDGTKKTTTVSVQNKDNVTNIVQSWISIVDDTSPAKDS 67
           +L  F +  + A + +  TR++FDG  K   ++V+N      ++QSW+   DD   +   
Sbjct: 13  LLGLFAVGQATAGISLSSTRLVFDGQHKEAGITVRNSGEDI-LIQSWVD-TDDADASSVP 70

Query: 68  FITTPPLFRLKAGEQGFVRILRSGKPLPEDRESMFWLNVKGIPAMDNEPDKNMVQFAINS 127
           F  TPPL R+ + EQ  +R++  G  +P DRES+ WLNV+ IP       +N +Q A+  
Sbjct: 71  FAVTPPLARVTSNEQQLLRVIYEGTGMPTDRESVVWLNVQEIPKASK--TENTLQLAVRQ 128

Query: 128 RIKLIYRPAALKN---VIPENFSEKLQWSSEGREIKVKNNSPLYMNFSAIYINGKALPEA 184
           RIK+ +RPA +KN   + P     +L        ++V N    +++ + I +   A+ E 
Sbjct: 129 RIKVFFRPAGMKNNAYLAPTELRWQLAEHGGKPVLRVSNPGAYHVSIADITLQAGAVSEH 188

Query: 185 WF----VAPYSTIKIPVASATSSGKREVTWSVINDYGMSGPKYTAII 227
            F    +AP    +  +     +    + +S INDYG   P Y+A I
Sbjct: 189 PFDTMMIAPGEQKEFVLKQLPVTNTAHLKFSSINDYGAQDP-YSAQI 234