Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase RhlB from Klebsiella michiganensis M5al

Subject, 592 a.a., ATP-dependent RNA helicase RhlB from Rhodanobacter sp. FW510-T8

 Score =  450 bits (1157), Expect = e-131
 Identities = 232/437 (53%), Positives = 301/437 (68%), Gaps = 16/437 (3%)

Query: 1   MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT 60
           MS+T LT+  F++F LHP + + L+  GF  CTPIQ L LPL L GRDVAGQAQTGTGKT
Sbjct: 16  MSQTVLTDTFFANFDLHPLLQQGLDDSGFTRCTPIQELTLPLALAGRDVAGQAQTGTGKT 75

Query: 61  MAFLTSTFHYLLTHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG 120
            AFL +  + LLT PA+ADR+ + PRAL++APTRELA+QI  DA  + + TGLK  L YG
Sbjct: 76  CAFLVALMNRLLTTPAVADRKDSDPRALVIAPTRELAIQIDKDARNIGRHTGLKTALIYG 135

Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180
           G  YDKQ + L+ G DI+I T GRL+DY KQ   +L +++V+V+DEADRM+DLGFIKD+R
Sbjct: 136 GVDYDKQRQQLKDGCDIVIATPGRLLDYHKQGVFSLNSVEVMVIDEADRMFDLGFIKDVR 195

Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240
           ++FR++PP  QR  +LFSATLS+RV ELA+E M+ AE V VE +  T  ++++ +++P+ 
Sbjct: 196 FIFRKLPPREQRQVLLFSATLSHRVLELAYEHMHEAEKVVVESDNVTADKVRQLVYFPAK 255

Query: 241 EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD 300
           EEKM LL  L++   P R+IIF NTK   E +   +   G RVG ++GDV Q KR ++L 
Sbjct: 256 EEKMPLLLNLIDRLKPSRSIIFVNTKAAAERVTERVKRHGCRVGAISGDVPQLKRQKLLQ 315

Query: 301 EFTRGDIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360
            F  G +DILVATDVAARGLHIP V+HVFNYDLP + EDYVHRIGRT R GA G +IS A
Sbjct: 316 RFQEGQLDILVATDVAARGLHIPHVSHVFNYDLPHEAEDYVHRIGRTARLGAEGDAISFA 375

Query: 361 CEEYALNLPAIETYIGHSIPVSKYNSDALMTELPRPL----------------RLTRPRP 404
           C+ YA++LP IETYIG SIPV+  + + L+   P  +                 +  PRP
Sbjct: 376 CDLYAMSLPDIETYIGQSIPVAAMDPELLVMPKPHAIDAEFAANAAADSAAFGDVVAPRP 435

Query: 405 GNGPRRNGPPRNRRRSG 421
           G  PRR+G      RSG
Sbjct: 436 GEKPRRSGGAGRGERSG 452