Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase RhlB from Klebsiella michiganensis M5al

Subject, 428 a.a., ATP-dependent RNA helicase RhlB from Dickeya dadantii 3937

 Score =  767 bits (1980), Expect = 0.0
 Identities = 379/428 (88%), Positives = 398/428 (92%), Gaps = 7/428 (1%)

Query: 1   MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT 60
           MSKTHLTEQKFSDFALHP VIEALE KGFHNCTPIQALALPLTL GRDVAGQAQTGTGKT
Sbjct: 1   MSKTHLTEQKFSDFALHPQVIEALENKGFHNCTPIQALALPLTLSGRDVAGQAQTGTGKT 60

Query: 61  MAFLTSTFHYLLTHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG 120
           +AFL STFHYLLTHPA A+RQ NQPRALIMAPTRELAVQIH DAE LA++TGL+LGLAYG
Sbjct: 61  LAFLASTFHYLLTHPAPAERQTNQPRALIMAPTRELAVQIHTDAEALAKATGLRLGLAYG 120

Query: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180
           GDGYDKQLKVLE GVDILIGTTGRLIDY KQNH+N+GAIQVVVLDEADRMYDLGFIKDIR
Sbjct: 121 GDGYDKQLKVLEDGVDILIGTTGRLIDYTKQNHVNMGAIQVVVLDEADRMYDLGFIKDIR 180

Query: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240
           WLFRRMP ANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
Sbjct: 181 WLFRRMPSANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240

Query: 241 EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD 300
           EEKMRLLQTL+EEEWPDR IIFANTKHRCEDIWGHLA+DGHRVGLLTGDVAQKKRLRIL+
Sbjct: 241 EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDIWGHLASDGHRVGLLTGDVAQKKRLRILE 300

Query: 301 EFTRGDIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360
           +FT+G++DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG SISLA
Sbjct: 301 DFTQGNLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGCSISLA 360

Query: 361 CEEYALNLPAIETYIGHSIPVSKYNSDALMTELPRPLRLTRPRPGNGPRRNGPPR----- 415
           CEEYALNLPAIE YIGH IPVSKY+S+AL+TELP P RL+RPR   GPRR G PR     
Sbjct: 361 CEEYALNLPAIEDYIGHRIPVSKYSSEALLTELPEPKRLSRPRSAGGPRRPGAPRRSGAP 420

Query: 416 --NRRRSG 421
             NR+R G
Sbjct: 421 RNNRKRPG 428