Pairwise Alignments
Query, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Klebsiella michiganensis M5al
Subject, 503 a.a., sugar ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235
Score = 440 bits (1132), Expect = e-128
Identities = 236/494 (47%), Positives = 326/494 (65%), Gaps = 3/494 (0%)
Query: 1 MEALLQLKGIDKAFPGVKALSGASLNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGS 60
M L+ + + K+FPGV+AL + G V AL+GENGAGKST+MK+L G+Y RD+G
Sbjct: 1 MTPLISVNRLSKSFPGVRALHEVQFELMAGEVHALMGENGAGKSTLMKILAGVYTRDSGE 60
Query: 61 LLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGK-IDWKTMY 119
+L+ GK F P +Q GIGIIHQEL L+ LT+A+N+F+GRE R G +D +
Sbjct: 61 ILYDGKPVDFTSPGEAQALGIGIIHQELQLMNHLTVAQNMFIGREPRGRLGLFLDEDRLN 120
Query: 120 AEADKLLAKLNLRFNSQKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETES 179
A+A ++L ++++ + + +V L++ QQMVEIAK LSF+S+V+IMDEPT AL D E
Sbjct: 121 AQAREILTRMHVNLDPRTVVDSLTVASQQMVEIAKALSFDSRVLIMDEPTSALNDAEIAE 180
Query: 180 LFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLDEDLLIEMMVG 239
LFR+IR+LK +G GI+YISH+M E+ +I D VTV RDG+++A A +I MMVG
Sbjct: 181 LFRIIRQLKERGVGIIYISHKMDELKQISDRVTVLRDGEYVATVATAESSVPAIIGMMVG 240
Query: 240 RKLEDQYPRLDK-APGAVRLKVDNL-CGSGVENISFILRQGEILGVAGLMGAGRTELMKV 297
RKL D P + G V L+V NL G V N+SF LR+GEILG AGLMGAGRTE+ +
Sbjct: 241 RKLADVEPHQNTHTAGDVALEVKNLNAGPLVRNVSFTLRKGEILGFAGLMGAGRTEVARA 300
Query: 298 LYGALPRSSGSVTLDGREVVARSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALR 357
++GA P SG + + G + + P D + + I Y+SEDRKR GL GM V+ N+ ++ L
Sbjct: 301 VFGADPVESGEIFVKGNKAQIKRPSDAVRHSIGYLSEDRKRFGLATGMDVESNIVMSDLG 360
Query: 358 YFSRGGGSLKHKDEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVL 417
F L+ ++ + FI L ++TPS Q + LLSGGNQQK+ IA+ L VL
Sbjct: 361 KFLSLNIFLRRMQIRKRAAHFINLLAIRTPSPTQPVRLLSGGNQQKIVIAKWLERDCDVL 420
Query: 418 ILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRIMVMHEGHLGGEF 477
DEPTRG+DVGAK EIY+L+ A+G +I+++SSE+PE+L MSDRI+VM EG + GE
Sbjct: 421 FFDEPTRGIDVGAKSEIYKLLRALAAQGKAIVMISSELPEILRMSDRIVVMCEGRITGEL 480
Query: 478 TREQATQEVLMAAA 491
+ +ATQE +M A
Sbjct: 481 SASEATQERIMHLA 494
Score = 94.4 bits (233), Expect = 9e-24
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 268 VENISFILRQGEILGVAGLMGAGRTELMKVLYGALPRSSGSVTLDGREVVARSPQDGLAN 327
+ + F L GE+ + G GAG++ LMK+L G R SG + DG+ V SP + A
Sbjct: 20 LHEVQFELMAGEVHALMGENGAGKSTLMKILAGVYTRDSGEILYDGKPVDFTSPGEAQAL 79
Query: 328 GIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRGGGSLKHKDEQQAVSDFIRLFNVKTP 387
GI I ++ + L+ ++V +NM + G + + QA R+ P
Sbjct: 80 GIGIIHQELQ---LMNHLTVAQNMFIGREPRGRLGLFLDEDRLNAQAREILTRMHVNLDP 136
Query: 388 SMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLS 447
+ L+ +QQ V IA+ L +VLI+DEPT ++ E++++I Q K G+
Sbjct: 137 --RTVVDSLTVASQQMVEIAKALSFDSRVLIMDEPTSALNDAEIAELFRIIRQLKERGVG 194
Query: 448 IILVSSEMPEVLGMSDRIMVMHEGHLGGEFTREQATQEVLMAAAVGKL 495
II +S +M E+ +SDR+ V+ + GE+ AT E + A +G +
Sbjct: 195 IIYISHKMDELKQISDRVTVLRD----GEYVATVATAESSVPAIIGMM 238
Score = 66.6 bits (161), Expect = 2e-15
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)
Query: 24 SLNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGSLLWLGKETTFNGPKSSQEAGIGI 83
S + G ++ G GAG++ + + + G ++G + G + P + IG
Sbjct: 275 SFTLRKGEILGFAGLMGAGRTEVARAVFGADPVESGEIFVKGNKAQIKRPSDAVRHSIGY 334
Query: 84 IHQE---LNLIPQLTIAENIFLGR--EFVNRFGKIDWKTMYAEADKLLAKLNLRFNSQ-K 137
+ ++ L + + NI + +F++ + + A + L +R S +
Sbjct: 335 LSEDRKRFGLATGMDVESNIVMSDLGKFLSLNIFLRRMQIRKRAAHFINLLAIRTPSPTQ 394
Query: 138 LVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYI 197
V LS G+QQ + IAK L + V+ DEPT + +++++R L +QG+ IV I
Sbjct: 395 PVRLLSGGNQQKIVIAKWLERDCDVLFFDEPTRGIDVGAKSEIYKLLRALAAQGKAIVMI 454
Query: 198 SHRMKEIFEICDDVTVFRDGQFIAEREVASLDEDLLIEMMVGRK 241
S + EI + D + V +G+ E + ++ ++ + R+
Sbjct: 455 SSELPEILRMSDRIVVMCEGRITGELSASEATQERIMHLATQRE 498