Pairwise Alignments

Query, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Klebsiella michiganensis M5al

Subject, 513 a.a., fused D-xylose transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  426 bits (1095), Expect = e-123
 Identities = 228/512 (44%), Positives = 331/512 (64%), Gaps = 12/512 (2%)

Query: 1   MEALLQLKGIDKAFPGVKALSGASLNVYPGRVMALVGENGAGKSTMMKVLTGIYARDA-- 58
           M  LL++K I K F  VKA+    L +  G +++L GENG+GKST+MKVL GIY   +  
Sbjct: 1   MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYE 60

Query: 59  GSLLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTM 118
           G +++ G+E   +  + ++  GI IIHQEL L+ +LT+ ENIFLG E  +  G +D+  M
Sbjct: 61  GEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHN-GIMDYDLM 119

Query: 119 YAEADKLLAKLNLRFNSQKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETE 178
                KLLA+++L  +    VGDL +G QQ+VEIAK L+ + +++I+DEPT +LT+ ET 
Sbjct: 120 TLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETS 179

Query: 179 SLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLDEDLLIEMMV 238
            L  +IR+L+  G   +YISH++ E+  I D + V RDGQ I  R+ A + ED +I MMV
Sbjct: 180 ILLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMV 239

Query: 239 GRKLEDQYPRLDKAPGAVRLKVDNLCG--------SGVENISFILRQGEILGVAGLMGAG 290
           GR+L   YP      G   L++++L            V ++SF L++GEILG+AGL+GAG
Sbjct: 240 GRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAG 299

Query: 291 RTELMKVLYGALPRS-SGSVTLDGREVVARSPQDGLANGIVYISEDRKRDGLVLGMSVKE 349
           RTE ++ L+G  P    G + +DG++V  R+ Q  +A GI  + EDRKRDG+V  M+V +
Sbjct: 300 RTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGK 359

Query: 350 NMSLTALRYFSRGGGSLKHKDEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARG 409
           N++L AL  F+ G   L    EQ+ + + I+   VKT S + AIG LSGGNQQK  +AR 
Sbjct: 360 NITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARC 419

Query: 410 LMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRIMVMH 469
           L+  P++LILDEPTRG+D+GAK EIY+LINQ   +G+++I++SSE+PEVLG+SDR++VMH
Sbjct: 420 LLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMH 479

Query: 470 EGHLGGEFTREQATQEVLMAAAVGKLNRVNQE 501
           EG L         TQE +M AA+   + V ++
Sbjct: 480 EGKLKANLINHNLTQEQVMEAALRSEHHVEKQ 511