Pairwise Alignments

Query, 310 a.a., ABC-type multidrug transport system, ATPase component from Sphingomonas koreensis DSMZ 15582

Subject, 905 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  182 bits (461), Expect = 3e-50
 Identities = 115/294 (39%), Positives = 163/294 (55%), Gaps = 9/294 (3%)

Query: 2   TGDAAISVEGLTKRFGNRTVVDTVSLEVGRGRICGFLGPNGSGKTTTLRMICGLLIPDGG 61
           T D AI    LT RFG+ T V+ VS  +GRG I GFLG NG GKTTT++++ GL+    G
Sbjct: 264 TTDIAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPATEG 323

Query: 62  GGEVLGMDLLTQRELIKRRIGYMTQRFGLFEDLTIRENLAFVADAYGLD--EKMKRVDAA 119
              +LG  +  +    ++R+G+M+Q F L+ +L++R+NL   A  + L   E   R+D  
Sbjct: 324 SATLLGNPVNAKDLATRKRVGFMSQSFSLYGELSVRQNLVLHAQLFDLPKAESGPRIDEL 383

Query: 120 LERLGLETRAGQLAGTLSGGWKQRLALAACVLHDPEILLLDEPTAGVDPLARREFWDQVH 179
           ++R  L   A Q +G L  G +QRL+LA  VLH PE+L+LDEPT+GVDP AR +FW  + 
Sbjct: 384 IQRFDLGDVAEQPSGELPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLI 443

Query: 180 MLSAE-GTTVLVSTHYMDEAERCHDIAYIAYGVLLARGTADEIVVQSGLVALAGEGPGAD 238
            LS E G T+ +STH+M+EA+RC  I+ +  G +LA  T D +  Q     L        
Sbjct: 444 ELSREQGVTIFLSTHFMNEAQRCDRISLMHAGEVLACDTPDALQRQFHGDTLEA------ 497

Query: 239 RLAPKLERAPGVAMAAAFGPTVHVCGRDMAALRAAVADIAPGISWRETEPTLED 292
                LE+A G A +AA   TV   G    + R         ++ RE +  L D
Sbjct: 498 AFVTCLEQAQGEAKSAAPTATVSETGAPPVSKRGFSLARLLAVASREGKELLRD 551



 Score =  138 bits (347), Expect = 6e-37
 Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 8/224 (3%)

Query: 6   AISVEGLTKRFGNRTVVDTVSLEVGRGRICGFLGPNGSGKTTTLRMICGLLIPDGGGGEV 65
           A+   G+  R+G +  +  ++  +  G  CG +GP+G+GK++ L +I G+     G   V
Sbjct: 5   ALQATGINHRYGQQQALVDITFNLPAGTRCGLIGPDGAGKSSLLGLIAGVKKLQDGQLNV 64

Query: 66  LG--MDLLTQRELIKRRIGYMTQRFG--LFEDLTIRENLAFVADAYGLDEK--MKRVDAA 119
           LG  ++    R  +  RI +M Q  G  L+ +L+I EN+ F A  +GL +    +R+   
Sbjct: 65  LGGAIEDRRHRNSLYPRIAFMPQGLGGNLYPELSISENIRFFATLFGLSKADCEQRMHNL 124

Query: 120 LERLGLETRAGQLAGTLSGGWKQRLALAACVLHDPEILLLDEPTAGVDPLARREFWDQVH 179
           L    L   A + AG LSGG KQ+L L   ++HDP++L+LDEPT GVDPL+RR FW+ V 
Sbjct: 125 LLSTDLARFADRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRRFWELVE 184

Query: 180 MLSAE--GTTVLVSTHYMDEAERCHDIAYIAYGVLLARGTADEI 221
            +  E    T+LV+T YM+EAE+      +  G L+A G + E+
Sbjct: 185 SVRGERPQLTLLVATAYMEEAEQFEHCLMLDRGKLIADGLSSEL 228