Pairwise Alignments

Query, 548 a.a., Arabinose efflux permease from Sphingomonas koreensis DSMZ 15582

Subject, 412 a.a., MFS transporter from Magnetospirillum magneticum AMB-1

 Score =  165 bits (418), Expect = 3e-45
 Identities = 119/388 (30%), Positives = 186/388 (47%), Gaps = 15/388 (3%)

Query: 12  PLFRSVWMASLFSNFGGLIQSVGASWMMIGLGASPQMIALVQASTTLPIMLLSLWAGAVA 71
           P FR  +     S  G  +QSV  SW++  L  S  ++ +    +  P +++S  AG   
Sbjct: 21  PRFRRFFAGQALSILGTWVQSVAMSWLVYRLTGSAVLLGVTAFLSQAPQLVISPLAGLFI 80

Query: 72  DNLDRRRVMLAAQSFMLIVSAALAALTWAGLITPWSLLIFTFLIGCGTAINGPAWQASVG 131
           D  DRRR+ L  Q+ M+  +A LAA+T  G++TP  L+    L G   +++ P  Q+ +G
Sbjct: 81  DRFDRRRLFLCVQALMIAQAALLAAITALGVVTPAHLVGLAALFGVLNSVDTPLRQSMLG 140

Query: 132 DMV-PRPMLPDAVAFNSMGFNIARSAGPALGGAIVAVAGAAAAFLVNALSYIGLIAVLFR 190
            MV  R +L +A+A N+  FN AR  GP L G I++    +  F +NA S++G+   ++R
Sbjct: 141 GMVEDRALLRNAIALNASLFNSARFVGPPLAGLILSFTSESWCFAINAASFLGVAFAVWR 200

Query: 191 WKPDLPPRRLPRERLGVAMAAGIRYVRLSPNIRVVLARAALFGFGASALPALMPLIARDL 250
             P  P        +  A   G+ +   +  IR +L   A      SA   LMP++A++ 
Sbjct: 201 QPPQPPSG--ASGGMAEAFRQGLAFAWNNQTIRTLLFSVAALNLAGSAYGVLMPILAKEG 258

Query: 251 VGGGALTYGLLLGGFGAGAVLGAIGSRRLRTRLSTEALVRLATV---MLAAGAGLIALDP 307
             G A T G LLG  G GA+   +    + TR   E L+RL  +     A G G + L P
Sbjct: 259 FAGDASTLGWLLGATGGGALAATL---LVATRQRLEQLLRLVIMGWGCAALGLGGLGLSP 315

Query: 308 GLVLTLLALVLGGAGWVSALSTFNVSVQMASPRWVVARALALYQ-----MAAFGGMAGGS 362
            L   L A    G G  S   + N  +Q  +P  +  R ++ +      M A GG+A G+
Sbjct: 316 SLTPALAAAFCIGLGISSVNVSTNALLQSMAPDAIRGRVISYFTALRFGMDALGGLAAGA 375

Query: 363 WAFGT-IVEARGLPAALIAAAMVLLVSI 389
            A G  +    GL A L+AA  + + ++
Sbjct: 376 MAAGLGVAGTLGLEAGLVAAGALAMATL 403