Pairwise Alignments

Query, 309 a.a., rarD protein from Sphingomonas koreensis DSMZ 15582

Subject, 293 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 6e-27
 Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 8/283 (2%)

Query: 17  GLIQGLGAYGIWGVLPLFYWLLAGTDVGEVVAMRVLWSVAFLAAVIVAL---RRGPAILQ 73
           G++  + A  ++ V+  F  LL      E+   R+L +V  +   ++     RR   +LQ
Sbjct: 4   GVVLSVLASVLFAVMYYFTSLLTPLSGLEIFGWRMLLTVPCMTVFMIVSGEWRRVWELLQ 63

Query: 74  VLRT-PRTMLYLATSSLLISTNWLVYIWAIQNHHVLESSLGYFLNPLVNVLIGVVLLREK 132
           +L   PR +  +  SS L+     +++WA  N   L+ S+GYFL PL  VL G ++  E+
Sbjct: 64  LLAAKPRLIAGVLLSSALLGVQLWLFMWAPLNGRSLDVSVGYFLLPLTMVLTGRLVWGEQ 123

Query: 133 LNAAQIVAVALAAVGVSVLAVGAGGGIWISLTLAFTFGFYGLVRKVAPVGALEGLTLETL 192
           L+  Q +AV  AA+GV      AGG  W +L +   +  Y +VRK      L GL L+  
Sbjct: 124 LSYLQRIAVFFAALGVLNELYQAGGFSWATLVVIIGYPVYFIVRKYLKTDHLGGLWLDMA 183

Query: 193 ILAPVALGYLFWLGGGQGLTFGTGWAPTLLMIAS-GVVTAVPLLLFAAAARRLPYSTLGL 251
           ++ PVA  + F   G QG            +I   G+++A  L+ +  A+R L +S  GL
Sbjct: 184 LMLPVA--WWFVQSGEQGFAVMDAHPKLYALIPMLGLISASALVSYIIASRLLAFSLFGL 241

Query: 252 LQYLAPTIGFILAITFFGETMTAAHMICFAFIWTGLIIFGAHG 294
           L Y+ P +   +A+   GE +     + +  IW  +++    G
Sbjct: 242 LSYVEPVLLLAVAL-ILGEGIKGGEWLTYIPIWLAVMVLVFEG 283