Pairwise Alignments

Query, 394 a.a., Predicted Zn-dependent hydrolases of the beta-lactamase fold from Sphingomonas koreensis DSMZ 15582

Subject, 352 a.a., Outer membrane protein romA from Pseudomonas fluorescens GW456-L13

 Score =  121 bits (304), Expect = 3e-32
 Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 13/258 (5%)

Query: 112 VGHATVLIQANGLNILTDPIWSEVAGPFGLAGPRRTTAPAIDFDKLPKIDLVLVSHNHYD 171
           +GH+TVL++      +TDP+++E A P   AGP+R   P I  ++LP I+ V++SH+HYD
Sbjct: 80  LGHSTVLLKLRDKFWITDPVFAERASPVQWAGPKRFHQPPISLEELPPIEAVILSHDHYD 139

Query: 172 HLDLPTLKRLWARDKPAIITSLGNDTILRSAGIEA---RGLDWGERAALRPGVEVIVNRN 228
           HLD   + +L  + K   +T LG    L   GI+A   R LDW +   +  G++ I   +
Sbjct: 140 HLDHQAVLKLADKTK-HFLTPLGVGDTLIKWGIDASKVRQLDWWQGTEV-DGIQFIATPS 197

Query: 229 HHWGSRWFTDRNRALWSSFVVTLPGGNLFFAGDTGAGDYKWADQAASYGPIRLAILPIGA 288
            H+  R   D N  LW+S+V+      +FF+GD+G  D  +      YGP  L ++  GA
Sbjct: 198 QHFSGRGLFDSNSTLWASWVMIDGDTRIFFSGDSGYFD-GFKRIGEQYGPFDLTLMETGA 256

Query: 289 FRFQEGEMRTGSHIGPGEAIKLWNRMGRPTTLPMHWGTFRLSWEGYWTPPRMLRAIQACA 348
           +      +    H+ P + ++    +     LP+H GTF LS   ++ P      I A A
Sbjct: 257 YNVDWPHV----HMQPEQTLQAHLDLKGRWLLPIHNGTFDLSMHAWYEP---FDRILALA 309

Query: 349 GETSGRFAPQSLGRAWDI 366
            E +       +G A+++
Sbjct: 310 WERNVSITTPQMGEAFNL 327