Pairwise Alignments

Query, 619 a.a., Predicted ATP-dependent endonuclease of the OLD family from Sphingomonas koreensis DSMZ 15582

Subject, 667 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 92/464 (19%), Positives = 176/464 (37%), Gaps = 77/464 (16%)

Query: 1   LKIYAVSIENFR--GISSANLVLPDHAVLIGDNNTGKSSVLEAIDLALGPDRLSRRPPVD 58
           +K+ ++ I  F+  G    ++       L+G N  GK++ L+A+    G +   RR  + 
Sbjct: 25  MKLCSLRISGFQSFGQDITDITFDGVTYLLGPNGAGKTATLQALARMFGFEPGLRR--LR 82

Query: 59  EHDFFEGKYLPVAAASAEGGAVPDASGEAPVAEAPKITVEVTIVGLSEEQEARFGGNIEW 118
             DF                 VP    E P   +  I  + T     ++ E         
Sbjct: 83  RSDFH----------------VPLNEQEVPAQRSLWIEADFTFDETLDDAE--------- 117

Query: 119 LNVETGDFFTEANPAGVDAANIKAALRVTFIGGYDSDEDDFVGNTFYSRSLTEGDKP--- 175
            +     FFT+      D    +   R+  I   D + ++      Y   + E  +P   
Sbjct: 118 -DDTVPPFFTQMTLQTADGVP-RIRYRLEGILHPDGEVEE---RLHYVTRMDEHGQPTTL 172

Query: 176 EPFSKKDKQHCGFLFLRSLRTGSRALSLEHGSLLDIILRL------KEIRPQMWEGTIGT 229
           +P +K+++      +L + R  +  ++    +LL  +LR       ++   Q+ E     
Sbjct: 173 KPVAKRERDEIHVHYLPARRDPADHIAFGASALLGRLLRAVNWSDDRDSIKQLTEQITEC 232

Query: 230 LAAFDVASDPALGISGVLDSIDKSLKKYVPREWGVKPHLKVSNLTREHLRKVVTAFIATG 289
           L+  +     + G+SG    + K        ++   P L  +N   E + + ++     G
Sbjct: 233 LSENESIKTLSAGLSGAWQRLHKG-------DFFANPSLTFANSEIEAILRHLSISFTPG 285

Query: 290 DGDHAAPFYRQGTGTINMLVLAM------LSQIAEDKQNVIF-------------AMEEV 330
            G+    + R   G  +ML L++      + +     QN  F             A+EE 
Sbjct: 286 HGESNVDYARLSDGQKSMLYLSLVLTSLTIGREVRSGQNTSFDPLKLKPAAYTILAVEEP 345

Query: 331 ETAIPPYAQKRIVHELRK---LAAQSIVTSHSPYVLEEFKLDETVILSRANDGVLTQAQI 387
           E ++ P+   RIV  L+    + AQ+++ + +P +L   + D+   L   +      + I
Sbjct: 346 ENSLSPHYLGRIVSSLKSSVGVDAQALIATQAPSMLRRVEPDQIRYLRLNSKRETDVSTI 405

Query: 388 ALPDSVKHK---RYRQEFRTRFCEGLLSRRVLIAEGATEASAFP 428
            LPD  KH    ++ +E    F E   +R V++ EG +E    P
Sbjct: 406 VLPD--KHSDAYKFVREAVQAFPELYFARLVVLGEGDSEEIVLP 447