Pairwise Alignments

Query, 380 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 615 a.a., RNA polymerase sigma factor, sigma-70 family from Kangiella aquimarina DSM 16071

 Score =  159 bits (402), Expect = 2e-43
 Identities = 102/312 (32%), Positives = 175/312 (56%), Gaps = 14/312 (4%)

Query: 72  ATATPSTTSPTFADALSHLMHQAK-KLPLLSRQDE----QRLGEAIQRGLAVTQTSEMPL 126
           +T + S   PT+ +   H+  ++K   PL    +E    QR  + I+   +++       
Sbjct: 306 STFSGSEADPTWIE--QHVKKKSKYSEPLAEHAEEILKAQRKLQLIEESCSLSVMEIKEA 363

Query: 127 DGHTARLVAKAKEARERLISSNIRLVVKLVMRPNFRYRMDVDDLVQYGMIGLMRAAEKFD 186
           +   +   AKA+ A++ ++ +N+RLV+ +  +   R  +   DL+Q G IGLM+A +KF+
Sbjct: 364 NREMSIGEAKARRAKKEMVEANLRLVISIAKKYTNR-GLQFLDLIQEGNIGLMKAVDKFE 422

Query: 187 PDVGTRFSTYATWWIRQAVTRGIHNDGNVIRLPVHVIASIHRFRRTQRQLGLTQGRREHV 246
              G +FSTYATWWIRQA+TR I +    IR+PVH+I +I++  R  RQ+    GR    
Sbjct: 423 YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPQP 482

Query: 247 KLIAESLGWTDDYTARISLLSEMNVVSLDAPLGSDDGNGSTLGDLMADTA-DRPDEAVEL 305
           + +AE +   +D   ++  +++   +S++ P+G D+   S LGD + DT  D P +A   
Sbjct: 483 EELAERMEMPEDKIRKVLKIAK-EPISMETPIGDDE--DSHLGDFIEDTTIDSPVDAATG 539

Query: 306 LDIRAAVRSLVDDIQDERARDIVKRRFGFD-GPDETLQEIGDRYEVTRERIRQVEAKTLD 364
             ++     ++  +    A+ +++ RFG D   D TL+E+G +++VTRERIRQ+EAK L 
Sbjct: 540 ESLKEVTDEILAGLTAREAK-VLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALR 598

Query: 365 KLEKRAIAKGLR 376
           KL   + ++ LR
Sbjct: 599 KLRHPSRSEKLR 610