Pairwise Alignments

Query, 720 a.a., Methyl-accepting chemotaxis protein from Sphingomonas koreensis DSMZ 15582

Subject, 735 a.a., methyl-accepting chemotaxis protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  431 bits (1108), Expect = e-125
 Identities = 256/717 (35%), Positives = 398/717 (55%), Gaps = 29/717 (4%)

Query: 1   MLSFRRLMIAPKLLTIAGVLIASLFVAGFAVVIVQASNSVTGLSQDSADAQADAISKQLA 60
           M SF RL IA KL  +AG+ I +L +     V   +   V  ++   A++ A   S+++ 
Sbjct: 1   MFSFNRLSIALKLAVVAGLAIGALMIVAAIGVTAYSGAIVRDMAGRYAESAAQEASQEIR 60

Query: 61  GEIGTVDATVRSMSASLATLHRSGVRDRDIAMSVLKPNIDASPLALASWFFEEPLGFDGQ 120
            EI +     ++++A+L    ++G+ DR   M ++KPN +A+   + +WF   P      
Sbjct: 61  NEIVSAGTGAKTLAATLGAALQTGLTDRTAYMGLVKPNAEATDQVMGAWFMAAPDAVGAD 120

Query: 121 AA---PGRSGSTPAGAFMPYWIKRDGQVLMEPNVEAGLYSADYYKLSRESGKAALTEPYT 177
           AA      + S   G    YW++RDGQ+ +EP  +   +   YY     SG   + EPY 
Sbjct: 121 AAHIGDAATSSNVNGRLSIYWVRRDGQISLEPEADGSDFEQAYYTEPMASGAPVVVEPYE 180

Query: 178 YETGGKVITMTSVTYPVVSSGKVIGVAGIDIALTDISTHLNQIKPFGTGRVMLLSQSALW 237
              GG  + MTSV YPV ++G++IGVAG+DI L ++S  L  ++P GTGRV L+S   +W
Sbjct: 181 ESIGGGKVAMTSVAYPVRANGRIIGVAGLDITLANLSQRLAAMRPLGTGRVTLVSNKGVW 240

Query: 238 VAHPDAAARMKPYADAGADAVKQALTTGETQRIEMQGPDGDIVRT-IRPLRLPALNATWA 296
           VAHPD A R + YADAGAD V+  +   + Q +E    +G+ VR  ++P+ LP   ATWA
Sbjct: 241 VAHPDTAVRGQAYADAGADIVRNVIAERQAQAVEGVSVNGEPVRRLVQPVILPGQKATWA 300

Query: 297 VVMDVPVAALGAPAKHLAWQLVLVGVLVLAAVIAGLFYAVRAIVGRPLGALSVTVDRLAK 356
           VV+D+PVA + APA+ LA  L++ GVL++AA+I  L      ++ RP   L+  V  +++
Sbjct: 301 VVLDIPVATIEAPARQLALMLLVGGVLIIAAIIVALLITSDRLIRRPFARLTADVRTMSE 360

Query: 357 GGAQSLPYL--EREDEIGTLARASDVFR-----------QASEDRARADA---------- 393
           G    +P    ++ DE+G +ARA + FR           Q   +RA A+           
Sbjct: 361 G-RYDIPVAGADKADELGQIARALEGFRLELADGLARRDQQQRERAAAETDRRRHAEETE 419

Query: 394 LAAAEQKQVVDTVSAHLEALAGGDLTTEI-DAAFPPAYAALKSNFNKALGALRGLIGKVT 452
           L AA Q + V+T+   L  LA GDL   + +A F      +  ++N AL  L   +  + 
Sbjct: 420 LFAASQTRAVETLGEGLSRLAAGDLAWRMPEAGFTADTRRIPEDYNAALHQLHTTMTGIW 479

Query: 453 ESAATIRTGSHEIAGASEDLARRTEASAASLEETSAAVTQIDGRLKATAQAAGRTVARAD 512
            +A ++R G  +IA A++ L+RRTE  AA LE+T+AA+ ++   ++++A+ A R      
Sbjct: 480 TTAQSMRGGCQDIAAAADSLSRRTEQQAAGLEQTAAALDELTQTVRSSAENAERARDITQ 539

Query: 513 DAIATVADGREIASETVQAMTRVSESAKGIDDVIEGLDKIAFQTRVLAMNAAVEAGRAGE 572
            A A    G  +  + + AM+ + +S+  I+ ++  +D+IAFQT +LA+NA VEA RAGE
Sbjct: 540 AAQAAADKGEAVVQDAIGAMSEIEQSSTQINQIVGVIDEIAFQTSLLALNAGVEAARAGE 599

Query: 573 AGRGFAVVADLVSALAMRAEEEAGRARDQLTAAQHDIVTAVEMVRKVDGALAGISNDVAE 632
           AGRGFAVVA  V  LA R+   A   +  +  +Q ++    + V     +L+ I+  VAE
Sbjct: 600 AGRGFAVVASEVRGLAERSASAAKEIKALIALSQSNVQRGSDQVSLTRDSLSAIAVQVAE 659

Query: 633 VHSLLGQMATDNQAQSTAISQISVAIGTMDQATQQNAAMVEQTSAAARNLTTEVQAL 689
            ++L+  +A   + QS  I +I+VAI  MDQ TQQNAAMVE+++AA+  LT E   L
Sbjct: 660 ANALVRTIAAATREQSVGIGEINVAINQMDQFTQQNAAMVEESTAASHALTNEAGEL 716



 Score = 37.7 bits (86), Expect = 2e-06
 Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 28/201 (13%)

Query: 506 RTVARADDAIATVADGR-EIASETVQAMTRVSESAKGIDDV-IEGLDKIAFQTRVLAMNA 563
           R  AR    + T+++GR +I          + + A+ ++   +E  D +A + +     A
Sbjct: 346 RPFARLTADVRTMSEGRYDIPVAGADKADELGQIARALEGFRLELADGLARRDQQQRERA 405

Query: 564 AVEAGRAGEAGRGFAVVADLVSALAMRAEEEAGRARDQLTAAQHDIVTAVEMVRKVDGAL 623
           A E  R     R  A   +L +A   RA E  G    +L A       A  M        
Sbjct: 406 AAETDR-----RRHAEETELFAASQTRAVETLGEGLSRLAAGD----LAWRMPE------ 450

Query: 624 AGISNDVAEV-----------HSLLGQMATDNQAQSTAISQISVAIGTMDQATQQNAAMV 672
           AG + D   +           H+ +  + T  Q+       I+ A  ++ + T+Q AA +
Sbjct: 451 AGFTADTRRIPEDYNAALHQLHTTMTGIWTTAQSMRGGCQDIAAAADSLSRRTEQQAAGL 510

Query: 673 EQTSAAARNLTTEVQALSQQA 693
           EQT+AA   LT  V++ ++ A
Sbjct: 511 EQTAAALDELTQTVRSSAENA 531