Pairwise Alignments

Query, 153 a.a., NusB antitermination factor from Sphingomonas koreensis DSMZ 15582

Subject, 394 a.a., transcription antitermination factor NusB from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 57  DADVMFFDDIVKGVDARRDEIDALIASKLSSDWSFDRLDRPMRQILRAGTYELLARNDVP 116
           + D  FF +I   +    DE +  + ++ + +W  +R+    + I+     E+L    +P
Sbjct: 284 EEDKEFFQNIFN-LTIENDEANRALIAEKTKNWDIERIASTDKIIISMAVTEMLFFPSIP 342

Query: 117 TGAAISEYLDVTDAFYDRREKGFVNGLLDAIAK 149
               I+EY+D++  +   + K FVNGLLD +AK
Sbjct: 343 VKVTINEYIDISKTYSTPKSKQFVNGLLDVLAK 375