Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 218 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

 Score = 88.2 bits (217), Expect = 8e-23
 Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 1/156 (0%)

Query: 3   FEDELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRN 62
           F+  L   +P+LR FA +L      ADDL+Q ++ +A   R  + PGT   +W + ++RN
Sbjct: 19  FKQMLADVIPQLRAFARSLCGERELADDLVQETMLKAWGARTVFEPGTNFRAWTFTILRN 78

Query: 63  LWIDTIRAETRRCETFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPEQREAVALVVI 122
            +  T++   R    +       ++ A   Q+  VEL ++ RA++ LPP+QREA+ LV  
Sbjct: 79  HYF-TLQRRKRFVGQWDDLVAERLLCAPAAQDGVVELRDMLRALQQLPPDQREALVLVGA 137

Query: 123 EGFAYKEAAAILEIPMGTLTSRLVRGREALMARLGE 158
            G +Y+EAA I  +  GT+ SR+ R R  L A +G+
Sbjct: 138 GGISYEEAAKITGVATGTVKSRVSRARATLEALMGD 173