Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 231 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

 Score = 96.7 bits (239), Expect = 2e-25
 Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 5/152 (3%)

Query: 3   FEDELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRN 62
           F+ +L L +P LR F  +L+ S   ADDL+Q ++ +A   R ++  GT + +W + ++RN
Sbjct: 46  FKKQLALVIPHLRAFGRSLSGSRDVADDLVQETLLKAWAARKRFQAGTNMRAWTFIILRN 105

Query: 63  LWIDTIRAETRRCE--TFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPEQREAVALV 120
           L++  +R    R E    VA +   ++ A   Q+  V+L ++ RA+  LP  QREA+ LV
Sbjct: 106 LYLSQMRRARFRGEWDDLVADR---LLAAPAAQDKHVDLADMQRALLHLPQPQREALILV 162

Query: 121 VIEGFAYKEAAAILEIPMGTLTSRLVRGREAL 152
              GFAY+EAA I  + +GT+ SR+ RGR AL
Sbjct: 163 GAGGFAYEEAAEICGVAVGTIKSRVARGRVAL 194