Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 157 a.a., RNA polymerase sigma factor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  122 bits (305), Expect = 4e-33
 Identities = 71/147 (48%), Positives = 93/147 (63%), Gaps = 5/147 (3%)

Query: 11  LPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRNLWIDTIRA 70
           LPRLRRFA  L    ADA DL+Q +VERAL  R  +  GTRLDSW + +MR + ID  R 
Sbjct: 2   LPRLRRFARVLRPQDADAQDLVQQTVERALASRKGFRAGTRLDSWAFTIMRRIAIDDGR- 60

Query: 71  ETRRCETFVAPQTGEIVGA----DGGQEMTVELGNVARAMRALPPEQREAVALVVIEGFA 126
           + +R    V+P+      A      G+ +  +      A+ ALP +QR+AVALV+IEG +
Sbjct: 61  KAQRWSRVVSPEDDATPRAPDPAQAGEGLRTDALEARDAIDALPEDQRQAVALVLIEGLS 120

Query: 127 YKEAAAILEIPMGTLTSRLVRGREALM 153
           Y EAA +L +P GTLTSRLVRGR+AL+
Sbjct: 121 YAEAAQVLGVPAGTLTSRLVRGRQALV 147