Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor, sigma-70 family from Sphingomonas koreensis DSMZ 15582

Subject, 188 a.a., RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score =  101 bits (251), Expect = 8e-27
 Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 1/155 (0%)

Query: 3   FEDELLLHLPRLRRFAHALARSSADADDLLQASVERALLKRDQWVPGTRLDSWMYRLMRN 62
           F+ E+L  LP LR FA +L RS   ADDL+Q ++ +A  K+D + PGT + +W+  ++RN
Sbjct: 12  FKREMLAALPNLRAFAISLIRSRDRADDLVQDTIMKAWAKQDSFQPGTNMRAWLVTILRN 71

Query: 63  LWIDTIRAETRRCETFVAPQTGEIVGADGGQEMTVELGNVARAMRALPPEQREAVALVVI 122
            +   IR   R  +      T  +      Q  +V+L +   A+  LP +QREA+ L+  
Sbjct: 72  EFYSQIRKSGREVQDTDGVYTSRL-SVPPEQHGSVDLQDFRTALAKLPDDQREAILLIGA 130

Query: 123 EGFAYKEAAAILEIPMGTLTSRLVRGREALMARLG 157
            GFAY+EAA I   P+GT+ SR+ R R  L   LG
Sbjct: 131 SGFAYEEAAEICGCPVGTIKSRVSRARLRLQELLG 165